Pseudofrankia inefficax: FraEuI1c_1109
Help
Entry
FraEuI1c_1109 CDS
T01354
Name
(GenBank) guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FraEuI1c_1109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fri03019
]
FraEuI1c_1109
03016 Transfer RNA biogenesis [BR:
fri03016
]
FraEuI1c_1109
Enzymes [BR:
fri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FraEuI1c_1109
Messenger RNA biogenesis [BR:
fri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FraEuI1c_1109
Transfer RNA biogenesis [BR:
fri03016
]
Prokaryotic type
tRNA degradation factors
FraEuI1c_1109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
S1_RRP5
KH_KhpA-B
aRib
Motif
Other DBs
NCBI-ProteinID:
ADP79182
UniProt:
E3J046
LinkDB
All DBs
Position
1382814..1384997
Genome browser
AA seq
727 aa
AA seq
DB search
MDDSTTATEAVVTTPLGTRTIRFETGRLAKQAAGSVVAYLGDTMVLSATTASKNPKENLD
FFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSFTKGLRNEIQVVA
TVLALDPETLYDVVAINAASASTLLAGLPFTGPVGATRVGYVDGQWVAFPTHAELARATF
DMVVAGRVLEDDSDVAIMMVEAEATPGTVALLADGAPAPTEDVVAAGLEAAKPAIRELCR
AQRELAAAAAKPVREYPVFLDYTDDVLDVLTNAVGDELAAALRIAGKQERETELDRVKAL
AVEKVGSQFDGREKEIGAAYRALTKKLVRKRVVEDGLRIDGRATTEIRALSAEVDYVPRV
HGSALFERGETQILGVTTLAMLRLEQTIDTLNPDRTKRYMHNYNFPPYSTGETGRVGSPK
RREIGHGALAERALLPVLPSREEFPYAIRQVSEALSSNGSTSMGSVCASTLSLLNAGVPL
RAPVAGIAMGLIREGDAFVTLTDILGAEDAYGDMDFKVAGTREFVTALQLDTKLDGIPAN
VLAAALQQARAARLAILDVMAEAIEGPDEMSQHAPRVISVKIPVDKIGEVIGPKGKMINQ
IQADSGAEITVEDDGTIYIGAADGVSAETARSAINAIANPQMPEVGERYLGTIVKITNFG
AFVSLTPGKDGLLHVSKLKQLSGGKRVEKVEDVLNVGQKLQVEITEIDSRGKISLSPAEE
AAAVAGA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtggatgactcgacaacggcgaccgaggcggtcgtcaccaccccgctcggcacccggacg
atccggttcgagaccggccggctggccaagcaggccgcgggctccgtggtcgcctacctg
ggcgacacgatggtgctgtccgcgacgacagccagcaagaaccccaaggaaaacctggac
ttcttcccgctgacggtcgacgtcgaggagcggatgtacgcggccgggcgcatccccggc
tcgttcttccgccgcgagggccggccgagcgaggacgcgatcctgacctgccggctgatc
gaccggccgctgcgcccgtcgttcaccaagggcctgcgcaacgagatccaggtcgtcgcg
accgtgctcgcgctcgacccggagacgctctacgacgtcgtcgcgatcaacgcggccagc
gcgtcgacgctgctcgccggcctgccgttcaccggcccggtcggcgcgacccgcgtcggc
tacgtcgacggccagtgggtcgcgttcccgacccacgccgagctcgcccgcgccaccttc
gacatggtcgtcgccggccgcgtgctggaggacgactccgacgtcgcgatcatgatggtc
gaggccgaggcgaccccgggcaccgtggcgctgctcgccgacggcgctccggcgccgacc
gaggacgtcgtcgccgccggcctcgaggccgcgaagcccgcgatccgcgagctgtgccgg
gcccagcgggagctggccgccgccgcggccaagccggtccgcgagtaccccgtgttcctg
gactacaccgacgacgtgctggacgtgctgaccaacgcggttggcgacgagctggccgcc
gcgctgcggatcgccggcaagcaggagcgcgagaccgagctggaccgggtcaaggccctg
gcggtcgagaaggtcggctcgcagttcgacggccgcgagaaggagatcggcgcggcctac
cgggcgctgaccaagaagctggtccgcaagcgggtcgtcgaggacggcctgcgcatcgac
ggccgggccaccaccgagatccgcgcgctgtccgccgaggtggactacgtgccgcgggtg
cacggctcggcgctgttcgagcgtggcgagacccagatcctgggtgtcacgacgctggcg
atgctccggctggagcagaccatcgacacgctcaacccggaccgcaccaagcgctacatg
cacaactacaacttcccgccgtactcgaccggtgagaccggccgggtcggctcgccgaag
cgccgcgagatcggccacggcgcgctggccgagcgggcgctgctgccggtgctgccgagc
cgcgaggagttcccctacgcgatccggcaggtctccgaggcgctcagctccaacgggtcg
acctcgatgggctcggtgtgcgcgagcacgctgtcgctgctgaacgccggtgtgccgctg
cgggcgccggtcgccggcatcgcgatgggcctgatccgcgagggcgacgcgttcgtcacg
ctgacggacatcctgggcgccgaggacgcgtacggcgacatggacttcaaggtcgccggc
acccgcgagttcgtcaccgccctgcagctggacaccaagctcgacggcatcccggcgaac
gtgctcgccgccgccctgcagcaggcccgcgcggcccggctcgcgatcctcgacgtcatg
gccgaggccatcgagggcccggacgagatgtcgcagcacgcgccgcgggtcatctcggtc
aagatcccggtggacaagatcggcgaggtcatcggcccgaagggcaagatgatcaaccag
atccaggccgacagcggggccgagatcaccgtcgaggatgacggcacgatctacatcggc
gcggccgacggcgtctccgcggagacggcgcgctcggcgatcaacgcgatcgccaacccg
cagatgccggaggtcggggagcgctacctcggcacgatcgtgaagatcacgaacttcggc
gccttcgtctccctcaccccgggcaaggacggcctgctgcacgtcagcaagctcaagcag
ctctcgggcggcaagcgggtggagaaggtcgaggacgtgctcaacgtcggccagaagctg
caggtcgagatcaccgagatcgacagccgcggcaagatcagtctctcgccggcggaggaa
gccgccgccgtcgcgggcgcctga
DBGET
integrated database retrieval system
