Pseudofrankia inefficax: FraEuI1c_1128
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Entry
FraEuI1c_1128 CDS
T01354
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
fri
Pseudofrankia inefficax
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fri03009
]
FraEuI1c_1128
Enzymes [BR:
fri01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FraEuI1c_1128
Ribosome biogenesis [BR:
fri03009
]
Prokaryotic type
ribosomal protein modification factors
FraEuI1c_1128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TraT
THOC7
Motif
Other DBs
NCBI-ProteinID:
ADP79201
UniProt:
E3J123
LinkDB
All DBs
Position
1411739..1413271
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AA seq
510 aa
AA seq
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MPAGQAHRVALVTLGCSRNEVDSEELAARLAAGGFRLVDDAADADAVLVNTCGFVDVAKK
DSIDALLAADGLRGGGGSGPGPQAVVAVGCLAERYGAELAESLPEADAILGFDAYPDIAD
RLSAVLAGNRPAAHVPRDRRSLLPISPVDRGAAAAGVVVPGHGTHAPTSVGAAVVRRRLD
DGPVAALKISSGCDRRCSFCAIPSFRGSHVSRPPQDILAEAEWLAGQGARELVLVSENST
SYGKDLGDLRALEKLLPQLAATPGIVRVRTVYLQPAETRPTLLEVLLTTPGVAPYLDLSF
QHASPAVLRRMRRFGGSADFLDLLRRGRAFAPALGARSNFIVGFPGETPEDLDILADFLE
QAELDAIGIFGYSDEDGTEAVGLPGKLSEAEIEDRRARIADLVEQLTAARAERRVGETVE
VLVEEIDPDATLDAEAARFAYGSAAHQQRDADGACSVRLSAGASDVPVAVGDLVAARVVG
TEGVDLVTELVEVVDRASGGSVPVAAGARP
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgccggtcaagctcatcgcgtcgctctggtcacgctgggctgttcgcgcaacgag
gtcgactcggaagagctcgccgcccggctggcggcgggcggcttccggctggtcgacgac
gccgccgacgccgacgcggtgctggtgaacacctgcggcttcgtcgatgtggccaagaag
gactcgatcgacgcgctgctcgccgcggacgggctacgcggcggtggcggcagcgggccc
ggcccgcaggccgtcgtcgcggtcggctgcctcgccgagcgttacggtgccgaactcgcc
gagagcctgcccgaggccgacgccatcctcggcttcgacgcctacccggacatcgccgac
cggctgtccgccgtgctggccggcaaccggccggccgcgcacgtgccgcgcgaccgccgg
tcgttgctgccgatcagcccggtcgaccgtggcgcggcggcggccggggtggtcgtacca
ggacacggcacgcacgcgccgacgagcgtgggcgcggcggtggtccgccggcggctggac
gacgggccggtcgcggcgctgaagatctccagcggctgcgaccggcggtgcagcttctgc
gcgatcccgtcgttccgcggctcgcacgtctcccggccgccgcaggacatcctggccgag
gccgagtggctggccggccagggcgcccgcgaactggtgctcgtcagtgagaactcgacc
tcctacggcaaggacctcggcgacctgcgcgccctggagaagctgctgccgcaactggcg
gccacgcccggcatcgtccgggtccgcacggtgtacctgcagcccgccgagacccgcccg
acgctgcttgaggtgctgctgaccaccccgggggtcgcgccctacctggacctgtcgttc
cagcacgcgagcccggccgtgctgcgccggatgcgccggttcggtggctcggccgacttc
ctcgacctgctgcgccgcggccgtgccttcgcgccggccctgggtgcccggtcgaacttc
atcgtcggcttccccggcgagacgcccgaggacctcgacattctcgccgacttcctcgaa
caggccgagctggacgcgatcgggatcttcggctactcggacgaggacggcaccgaggcc
gtcggcctgcccggcaagctctccgaggccgagatcgaggaccgccgtgcccggatcgcc
gacctcgtcgagcagctcaccgccgcccgcgccgagcgcagggtcggcgagaccgtcgag
gtcctggtcgaggagatcgaccccgacgcgacgctcgacgccgaggcggcccggttcgcc
tacggcagcgccgcgcatcagcagcgtgacgccgacggtgcctgctccgtgcggctctcg
gcaggtgccagcgacgtgcccgtggccgtcggcgacctggtggcggcccgggtggtcggc
accgagggcgtggacctggtgaccgagctcgtcgaggtggtcgaccgggccagtggcggg
tcggtgccggtagccgccggagcccgtccgtga
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