Pseudofrankia inefficax: FraEuI1c_1347
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Entry
FraEuI1c_1347 CDS
T01354
Name
(GenBank) YD repeat-containing protein
Organism
fri
Pseudofrankia inefficax
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
DUF6531
RHS
T7SS_signal
ADPRTs_Tse2
WXG100_2
Motif
Other DBs
NCBI-ProteinID:
ADP79414
UniProt:
E3J3S7
LinkDB
All DBs
Position
complement(1683635..1688353)
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AA seq
1572 aa
AA seq
DB search
MTSDWQVLGLDTDPTPGDPAAVHALATRLGRNATTADDGTRRLRAVAAGGGDLAMRGDYA
ASYTGAFDDLPGQLAKLARAYRDCGTALSAYATTLGRAKSQAGAALRQGLDAHTRYQGAI
ARVETMLPAERALLLWPNDELSPGSIAAATADLPGPNVADQVRVVARQGEDARHDRDLAA
RLARDAASLRDGAARTCAEGIDTALRDSGIKNRPWYLKAWDSTRHVVTEPFTSWHNFVGF
CADVALVVGVAAMVVSGPAGWILGAVVLGASAVVLTDALRRYGRGQASLGEVLIDAVGVI
PGGRGAAEGARGLGEAARAVRAGRGGSRIVTAALRLGRARPPLATLGRRLGTATPRGLEE
AGRIRGPLRRAEVYAKAAWCRVTGRDPIDLASGQMILDQDDVELPGVLAWTLRRTYQSGY
TAGRWFGAGWSSTVDLRLEVDHGGVCFAAADGVALAFPHPTPGDPPVLPEAGPRLELALD
EAGRYTILDAAAGHSYLFAIPADGQRDVALPLAAVVDRNGNRIELGYDADGELAQISHSG
GYQLTVRTDGHRIVAVAAATAEGEQTLVRYGYDATGQLTQVVNSSGRALRFDYDPDGRIV
RWLDRNGTEYRYTYDATGRVVRTAGSDDYLAGTLAYDDERHVTTETNSLGHVTAHHFTDR
LRPARHVDPLGRVTAFGWDRFDNRTEVTDPLGRTIRYRYDDIGNLVTVERPDGTQTTTTW
NAQRRPLVSVDANGARWEREYDTRGNLAAVVDPTGGRTDLVHDDRGRLIALTDALGQLTQ
VETDAAGLPIAVIDPAGAVTSWDRDALGRVVATTDPLGGVTRLSWTPEGHLTSRGRPDGA
TDTYRYDPEGNLVEQVDPAGFTTRTEYTHFDLPTVRTSPDGSRMAFGYDTELRLTSVTNP
QGLRWSYEYDAAGQLVAETDFDGRTIRYDYDAAGQLVGRTNGAGETVTFARDSGGDIVAR
SGPDGTSTFAYDATGRVVRATSPDAEVLVERDLLGRVTAEICDGRRLASRYDPLGHRTRR
TTPSGAISSWEHDPAGRPLALRTAGQLLTFTHDAAGHELERHLVRDAPGGAEVVLTQRWD
ARDQLRSQALVVGPGPAGPGPAGLGQPAGAGTARLLQRRDFAYTSDGYLAETDDLLAGVH
HFELDAMRRVTAVRGGAWAERYAYDPAGNLTHAAWPASVDPDTADEQGERGYDGTLIRQA
GKTRYEHDAQGRIILRRQLRPAGETDDWRYTWDADDHLTAVTTPDGTVWQYRYDAFGRRI
AKQRLSSAGDIVEQITFVWDGLVLAEQHHTVQAEPGETAGPSTTTVTTWDWEPNTFRPLT
QSERRPTGDQASSANSRPDDPDQAWYDTQFHAIVTDLIGTPTELVDPDGRLAWHSRATLW
GVSPPSTPTTTDCPLRFPGQYHDPETGLNYNFHRYYDPATARYKTSDALGLSPAPNPWTY
VTNPLTWIDPFGLAPCKDLLHAFGNAQGPRAPRLGKDFDIGPDGMIIPQEPPEVKGASTF
ADVTKVPVRGIYHSIPADTPMPDGIGLIRDGRDAGGVHFPTHASIYPTKPMKPDDFVEKF
LGLPWKRAGRKN
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgactggcaggtgctgggcctcgacaccgatcccacaccgggagatccggcg
gccgtccatgcgctcgccacccggttggggcgcaacgcgacgacggccgacgacggaacc
cggcggctgcgcgcggtcgcggccgggggcggcgacctggcgatgcggggcgactacgcg
gccagctacaccggcgcgttcgacgatctcccgggccagctggcgaagctcgcccgcgcc
taccgcgactgcggcacggcgctgtccgcctacgccaccacgctcgggcgcgcgaagtcc
caggccggcgccgccctgcgccagggcctcgacgcccatacccgctaccagggcgcgatc
gcccgcgtcgagacgatgctgccggccgagcgggcactgctgctgtggccgaacgacgag
ctcagcccaggctcgatcgcggccgcgaccgccgacctgccaggcccgaacgtggccgac
caggtgcgggtggtcgcccgccagggcgaggacgcccgccacgaccgcgatctcgcggcc
cggctcgcccgggacgccgccagcctgcgcgacggcgcggccaggacctgcgccgaaggg
atcgacaccgcgctacgggacagcgggatcaagaaccggccctggtacctcaaggcgtgg
gacagcacccgccacgtcgtcaccgagccgttcacgtcctggcacaacttcgtcgggttc
tgcgccgacgtggcgctcgtcgtgggcgtcgccgcgatggtggtctccggtccggccggc
tggattctcggcgccgtcgtgctgggcgcgagcgccgtcgtcctcacggacgcgctacgc
cgctacggccgcggccaggcatcgctcggcgaggtgctgatagacgcggtcggcgtcatc
cccggtggccgaggcgcggccgagggcgcgcgcgggctgggtgaggccgcccgggccgtc
cgcgcgggccgcggtggctcgcggatcgtgacagcggccctgcgcctgggccgggcgcgg
ccgccgctggcgacgctcggccgccggctcgggaccgccacgccacgcggcctggaggag
gccggccggatccgcggtccgctgcggcgcgccgaggtgtacgcgaaggcggcctggtgc
cgggtcaccggccgcgacccgatcgacctggccagcggccagatgatcctcgaccaggac
gacgtcgagctacccggcgtcctggcgtggacgctgcggcgcacctaccagtcgggttac
accgccggccgctggttcggcgccggctggagttccacggtggacctgcggttggaggtc
gaccacggcggcgtctgcttcgcggcggcggacggggtggcgctcgccttcccgcatccg
acgccgggcgacccgccggtgctgcccgaggcggggccaaggctggagctggcgcttgac
gaggccggccgctacacgatcctggacgcggccgccggccacagctacctgttcgcgatt
cccgccgacggccagcgcgacgtggcgttgccgctggccgcggtcgtcgaccgcaatggc
aaccggatcgagctcggctacgacgccgacggtgagctcgcccagatcagccattccggc
ggctaccagctcaccgtgcggaccgacggccaccggatcgtggccgtcgccgccgccacg
gccgagggcgagcagaccctggtccgctacggctacgacgcgaccggccagctcacccag
gtggtcaactcatcgggccgagcgctgcggttcgactacgaccccgacggtcggatcgtc
cgctggctcgatcgcaacggcaccgagtaccgctacacctacgacgccaccggccgggtc
gtacgtaccgccggctcggacgactacctcgccggaacactcgcctacgacgacgaacgc
cacgtcacgacggaaacgaactcgctggggcacgtcaccgcgcaccacttcaccgatcgg
ctgcgccccgcacgccacgtcgacccgctcggccgggtgaccgccttcggctgggaccgc
ttcgacaatcggacggaggtcaccgatccactcggccgcacgatccgctaccgctacgac
gacatcggcaatctcgtcacggtcgaacgcccggatggcacccaaaccacgacgacctgg
aacgcgcagcgccggccactggtatccgtggacgccaacggcgcccgctgggagcgcgag
tacgacacccgcggcaacctggccgccgtcgtcgacccgaccggtggccgcaccgacctc
gtccacgacgaccgtggccgactgatcgcgctcactgacgccctgggccagctgacccag
gtcgagaccgacgccgccggtctgccgatcgccgtgatcgacccggccggcgcggtcacc
tcctgggatcgggacgccctcggccgcgtggtcgcgacgaccgacccgctcggcggcgtc
acccgcctttcctggacgcccgagggccacctgaccagtcgcggtcgccccgacggagcc
accgacacctaccggtacgaccccgagggaaacctcgtcgaacaggtcgatccggccggc
ttcaccacccgcaccgagtacacccacttcgatcttccgaccgtgcgcacgagccccgac
ggcagccggatggccttcggctacgacaccgagctccggctgaccagcgtcaccaacccg
cagggcctgcgctggagctacgagtacgacgccgccggccagctcgtcgccgagaccgac
ttcgacggccgaacgatccgctacgactacgacgccgccggccagctggttggacgaacc
aacggcgcgggcgagaccgtcaccttcgcccgggactcgggtggggacatcgtcgcgaga
tccggcccggacggcacctccacgttcgcctacgacgccaccggccgagtcgtgcgcgcc
accagcccggacgccgaggttctcgtcgaacgcgacctcctcggccgagtcaccgcggag
atctgcgacgggcgccgtctggcctcgcgctatgacccactgggccaccgaacccggcgc
accacaccgtcgggtgccatcagttcctgggaacacgaccctgccggccggccgctggcg
ctccgcacggccggccagctcctgaccttcacccacgacgcggcaggccacgagctcgaa
cgccacctagtccgcgacgcccccggcggcgccgaggtcgtgctcacccagcggtgggac
gccagggatcagctgcgctcccaggcactcgtcgtcggcccgggccccgccggcccgggc
cccgccgggcttgggcagccggccggggccggcaccgccagactccttcagcgccgcgac
ttcgcctacacgtcggacggctacctcgccgaaaccgacgatctcctggccggcgtgcat
cacttcgagctcgacgcgatgcgccgcgtcaccgccgtccggggcggcgcctgggcggag
cgctatgcctacgaccctgccggcaatctcacccacgccgcgtggccagcgtccgtcgac
cctgacaccgccgacgaacagggcgagcgcggctacgacggcacgctgatccgtcaggcg
ggcaagacccgctacgagcacgacgcgcaaggccggataatcctgcgccggcagctccgc
cccgccggggagaccgacgactggcggtacacctgggacgccgacgatcacctgaccgca
gtcacgacacccgacggcaccgtctggcaataccgctacgacgccttcggccgacgcatc
gccaaacaacgcctcagtagtgccggcgacatcgtcgaacagatcaccttcgtctgggac
ggcctcgtcctcgccgaacagcaccacacggtccaggctgagccgggcgaaaccgccggc
ccgagcacgacaacggtcaccacctgggactgggaacccaacaccttccggcccctcacc
cagtcggaacgccgccccaccggcgaccaggcctcgtctgccaactcccggccggacgac
cccgatcaggcctggtacgacacccagttccacgccatcgtcaccgacctgatcggcacc
ccaaccgagctggtcgaccccgacggccgcctggcctggcactcccgcgcgacgctctgg
ggcgtctccccaccatccaccccgaccacgaccgactgcccgctacgcttccccggccag
taccacgaccccgaaaccggcctcaactacaacttccaccgctactacgacccagcgaca
gcacgctataaaacgtccgacgccttgggactctcccctgcgcccaatccgtggacctac
gtaacgaacccgctaacctggatcgaccctttcggacttgcaccatgcaaggatctcctc
cacgcattcggcaacgcacaaggacctcgagcccctcgcctcggtaaagatttcgacatc
gggcccgacggcatgataattcctcaggaaccccccgaggtgaagggggcctcaacattc
gcagacgtcacaaaggtgccagtaagaggcatatatcattccatacccgccgacaccccg
atgccagatgggattggacttatacgagacggcagagacgccggcggcgtacattttccg
acccacgcaagcatatacccaacaaaaccgatgaaaccagacgattttgtagagaagttc
ctcggactaccctggaaacgcgctggaagaaagaactaa
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