Pseudofrankia inefficax: FraEuI1c_1800
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Entry
FraEuI1c_1800 CDS
T01354
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri03030
DNA replication
fri03430
Mismatch repair
fri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FraEuI1c_1800
03430 Mismatch repair
FraEuI1c_1800
03440 Homologous recombination
FraEuI1c_1800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fri03032
]
FraEuI1c_1800
03400 DNA repair and recombination proteins [BR:
fri03400
]
FraEuI1c_1800
Enzymes [BR:
fri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FraEuI1c_1800
DNA replication proteins [BR:
fri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FraEuI1c_1800
DNA repair and recombination proteins [BR:
fri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FraEuI1c_1800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
DEDDh_C
TMV_coat
UVR
Motif
Other DBs
NCBI-ProteinID:
ADP79856
UniProt:
E3JBI4
LinkDB
All DBs
Position
complement(2211858..2213705)
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AA seq
615 aa
AA seq
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MDARTVGPGHYGRGVSLDQAAPRPALPPPDAVPAGRQGSFDELGRLLRDVTFVVFDLETT
GTGPTTAEITEFGAVKVRGGEVVAEFATLVRASTGIPPLITVLTGITDAMLATAPPLAEV
LPAFLEFIQGTVLVAHNAGFDLSFLKAACERVGYPVPTWEHLDTARLARRIVTRDESPNN
KLSSLARLFRARTEPCHRALADARATVDVLHGLFERLGNLGVTTLEDVHAYSARVSPAQR
RKRVLADDLPTGPGVYIFRDATGRVLYVGKSASVRARVRTYFTASETRSRMAEMVAAAER
VDAIACAHALEAEVRELRLIAEHKPPYNRRSRFPERVVFLRLTDEPFPRLSKVRQVRADA
GTYLGPFGGVGGAELAGDGLLDAVALRRCGGRLSPRVTSPACALADLGKCGAPCDGRQSV
ESYGDVVAAAREAMTGDPALVVAAARARIAGLAEQTRFEEAALVRDRMVAFVRAAARQQR
LTALGAVPELVGAVPTAERGWDLSVIRYGRLAAAATVARGIDPRPWVDAVVATAETVRPG
PGPTPAATVEEMERIERWLGSSGARLVQLTGTWAWPAASAHRAAAELPQPPPVERREPAE
RTLHQPGVLRRSGHS
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
gtggatgcccggactgtcggacctggtcactacggtcgcggtgtgtctctcgatcaggcc
gcgccgcgacccgcgctcccgccccccgatgccgtgcccgctgggcggcagggcagcttc
gacgagctgggccggctgctccgggacgtcacgttcgtcgtgttcgacctggagacgacc
ggcacggggccgaccaccgccgagatcaccgagttcggcgcggtgaaggtgcgcggcggg
gaggtggtggccgagttcgcgacgctggtccgcgcctcgaccgggataccgccgctcatc
acggtgctgaccgggatcaccgacgcgatgctggcgacggccccgccactcgccgaggtg
ctgccggctttcctggagttcatccagggcacggtgctggtcgcgcacaacgcgggcttc
gacctgagcttcctcaaggccgcctgcgaacgcgtcggatacccggtgccgacctgggag
cacctggacaccgcccggctggcgcgccggatcgtcacccgggacgagagtcccaacaac
aagctctcgtccctcgcgcggctgttccgggcccgtaccgagccgtgccaccgggccttg
gccgacgcacgggcgacggtggacgtgctgcacggcctgttcgaacggctcggcaacctc
ggagtgaccaccctcgaggacgtccatgcctacagcgcccgggtctcccccgcccagcgc
aggaaacgggtcctggccgacgacctgcccaccggtcccggggtctacatcttccgggac
gccaccgggcgggtcctctacgtcggcaagtcggcgtccgtccgcgccagggtgcgcacc
tatttcacggccagcgagacgcgcagccggatggcggagatggtggccgccgccgaacgg
gtcgacgcgatcgcgtgcgcgcacgcgctggaggccgaggtccgggaactgcgcctcatc
gccgagcacaagccgccgtacaaccgccgctcccggtttccggaacgcgtcgtcttcctg
cggctgaccgacgagccgttcccccggctgtcgaaggtccggcaggtccgcgcggacgcg
ggtacctacctcggccccttcggcggcgtgggtggcgcggagctggccggtgacggcctg
ctggacgcggtggcgttgcgccgctgtggcgggcggctctcgccccgggtgacgagcccc
gcgtgcgcgctggcggacctgggcaagtgtggcgctccctgcgacggccggcagtcggtg
gagtcgtacggagacgtcgtcgccgccgcccgcgaggcgatgacgggcgacccggcgctg
gtcgtcgcggcggcccgggcgcggatcgccgggttggccgagcagaccaggttcgaggag
gccgcgctggtgcgcgaccggatggtggcgttcgtccgcgccgccgcgcgccagcagcgg
ctgaccgcgctcggcgccgtccccgaactggtcggtgccgtcccgacagccgagcgaggc
tgggatctctcggtcatcaggtatggccggctcgccgcggccgcgacggtcgcccgcggg
atcgacccccgtccctgggtcgacgcggtcgtcgccaccgccgagacggtgcggccaggg
cccgggccgaccccggcggcgacggtcgaggagatggagcgcatcgagcgctggctgggc
agctcgggcgcccggctggtccaactgaccggcacctgggcctggcccgccgcgagcgcc
caccgcgccgccgccgaactaccgcaaccaccgccggtcgagcgccgggagcccgccgag
cgcaccctccaccagccgggcgtcctgcgccgctcaggccactcgtag
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