Pseudofrankia inefficax: FraEuI1c_1813
Help
Entry
FraEuI1c_1813 CDS
T01354
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri00061
Fatty acid biosynthesis
fri00071
Fatty acid degradation
fri01100
Metabolic pathways
fri01212
Fatty acid metabolism
fri02024
Quorum sensing
fri04146
Peroxisome
Module
fri_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FraEuI1c_1813
00071 Fatty acid degradation
FraEuI1c_1813
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FraEuI1c_1813
09145 Cellular community - prokaryotes
02024 Quorum sensing
FraEuI1c_1813
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fri01004
]
FraEuI1c_1813
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fri04147
]
FraEuI1c_1813
Enzymes [BR:
fri01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FraEuI1c_1813
Lipid biosynthesis proteins [BR:
fri01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FraEuI1c_1813
Exosome [BR:
fri04147
]
Exosomal proteins
Exosomal proteins of breast milk
FraEuI1c_1813
Exosomal proteins of breast cancer cells
FraEuI1c_1813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADP79869
UniProt:
E3JBJ7
LinkDB
All DBs
Position
2225531..2227351
Genome browser
AA seq
606 aa
AA seq
DB search
MREFTSPALVTVADDATLTDRVLGFAASQPDAPLIRHKVDGTFADLTAGQFVELVQAVAG
GLVTHGVTPGSRVGIMSRTRYEWTVLDYAIWTAGAVTVPIYETSSAEQIAWILTDAEVGL
VVAETPKLAALVAQVRDEAPALREVLVLDPAAGETGALETLRADGAAVPPAALAEARAGV
RADSLATLIYTSGTTGRPKGCELSHRALLFDALSSIAMAPDVFTAGASTLLFLPLAHVFA
RLVQNIAIQSCLPIAYTSDTKTLLADLAQAKPSYVLAVPRVFEKVHAGARQKAHNEGKGK
IFDAAEATAVAYSEALATPGGPGLVLRARHAVFDRLVYAKLRAALGGQVRNAVSGGAPLG
ERLAHFFRGIGVTILEGYGLTETSAAVTVNRPGNVRVGTVGQPLPGVTVRVADDGEVLVR
GPLVFTAYHANETATKEALDADGYFHTGDMGSLDVDGFLRITGRKKEILVTAGGKNVAPA
PLEHRLQTHPLISQAMVIGDRRPFIAALLTVDEEALPHWLAAHGRPRDTPASALVHDPEL
LADLQMAVDSANASVSHAEGIKKFSVLPADFTVETGELTPSLKVRRSLVMDRYASAVTEI
YGTAEA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgagttcacctcaccagccctggtcacagtggccgacgacgcgacgctcaccgac
cgggtgctcggcttcgccgccagccagcccgacgcgccgctgatccggcacaaggtggac
ggcacgttcgccgacctgaccgccggccagttcgtcgagctggtgcaagccgtggcgggc
ggcctcgtcacgcacggagtgacccccggcagccgggtcgggatcatgagcaggacccgg
tacgagtggaccgtgctggactacgcgatctggaccgccggcgcggtgacggtcccgatc
tacgagacgtccagcgccgagcagatcgcctggatcctcaccgacgccgaggtcggcctc
gtcgtcgccgagacgccgaagctcgcggcgctggtggcccaggtgcgcgacgaggctccg
gcgctgcgcgaggtgctcgtcctcgacccggcggccggcgagaccggtgcgctggagacg
ctgcgcgccgacggagcggccgtcccgcccgccgcgctcgccgaggcgcgcgccggcgtg
cgggccgacagcctcgcgaccctcatctacacctccggcacgaccgggcggcccaagggc
tgcgagctttcccaccgggcgctgctgttcgacgcactgtcctcaatcgcgatggccccc
gacgtgttcaccgccggggcctccacgctgctgttcctgccgctcgcgcacgtcttcgcg
cggctggtgcagaacatcgccatccagagctgcctgccgatcgcctacacgtccgacacg
aagacgctgctcgccgacctggcccaggcgaagccgagctatgtgctggcggtgccgcgg
gtcttcgagaaggtgcacgccggcgcccggcagaaggcccacaacgagggcaagggcaag
atcttcgacgccgccgaggcgaccgccgtcgcctacagcgaggcgctcgccacgccgggc
gggccggggctcgtgctgcgggcccgccacgcggtgttcgaccggctggtctacgcgaag
ctgcgcgccgcgctcggcggccaggtccgcaacgcggtgagcggcggcgccccgctcggt
gagcggctggcccacttcttccgcggcatcggcgtgacgatcctcgagggctacggcctg
accgagacgtcggccgccgtcacggtcaaccggccgggcaacgtccgggtcggcaccgtc
ggccagccgctgccaggggtgaccgtccgcgtcgccgacgacggcgaggtgctcgtgcgc
ggcccgctcgtgttcaccgcctaccacgcgaacgagaccgccaccaaggaggctctcgac
gccgacggctacttccacaccggcgacatgggcagcctcgacgtcgacggcttcctgcgg
atcaccgggcgcaagaaggagatcctggtgaccgccggcggcaagaacgtcgcgccggcg
cccctggagcaccggctgcagacgcatccgctgatcagccaggcgatggtgatcggcgac
cggcgcccgttcatcgccgcgctgctcaccgtcgacgaggaggcgctgccgcactggctg
gccgcgcacgggcggccgcgggacaccccggcgagcgcgctggtccacgaccccgagctc
ctggcggacctgcagatggcggtcgactccgcgaacgcgtccgtctcacacgccgagggg
atcaagaagttcagcgtgctgccggcggacttcaccgtcgagaccggcgagctgaccccg
agcctgaaggtgcgccgctccctcgtcatggacaggtacgcctcggccgtcaccgagatc
tacgggaccgccgaggcctag
DBGET
integrated database retrieval system
