Pseudofrankia inefficax: FraEuI1c_1971
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Entry
FraEuI1c_1971 CDS
T01354
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
fri
Pseudofrankia inefficax
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fri03400
]
FraEuI1c_1971
DNA repair and recombination proteins [BR:
fri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FraEuI1c_1971
Archaeal homologous recombinant proteins
FraEuI1c_1971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
GAP1-N2
Motif
Other DBs
NCBI-ProteinID:
ADP80021
UniProt:
E3ITX4
LinkDB
All DBs
Position
complement(2412050..2413489)
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AA seq
479 aa
AA seq
DB search
MLVLHTSDWHLGRRLHGFDLATAQAAYVDHLVQVTRAERVDLVVVAGDVHDRAIPPVGAL
RLFDEALSRLRDTGARVVVISGNHDAAARLGDKAGLLDPRVAIRTDPARLASAVVVEDRF
GPVRVYPVPYLEPAAVADVLPVVDDPADELETDPTDDPAPGVGAEGPVGTGPGDATDPAS
GPPSPALAEGPVEPPFPGMVSLFDEDELAPSLVPAAPRPPAFHDGRRRARRAAALTHAGT
MRRAMAAVRADLADHPGARSVVVAHAWVTGAAGSDSERDISVGGAAHVPAALFDGITYAA
LGHLHRPQRVLGRADLRYSGSPLAYSFSETQDAKASLLVELGPAGLARVEPVPVPVHRRM
TILRGPLEQLLTRLEYGEHTEDLVAAVLTDDARPVDAMSRLRARFPHTLVLRHEPEHAPA
DDGRTFTQRTRGRDDLDVAADFVDFARGTPADEDERSLLADALTAARLTAAWPDARGEA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtcctgcacacgtccgactggcatctcggacgtcgcctgcacggcttcgacctc
gccaccgcgcaggccgcgtacgtcgaccatctcgtccaggtgacccgcgccgagcgggtc
gacctggtcgtggtcgcgggcgacgtgcacgaccgggcgatcccgccggtgggcgcgctg
cggctgttcgacgaggcgctgtcccggctgcgcgacacgggagcccgggtggtggtcatc
agcggcaaccacgacgccgcggcacgcctcggcgacaaggccgggctgctcgacccccgc
gtcgccatccgcaccgacccggctcggctcgcgtccgccgtggtcgtcgaggaccggttc
ggcccggtccgggtctacccggtcccctatctggagccggccgcggtcgccgacgtgctt
cccgtggtggacgaccccgccgacgagctggaaaccgaccccaccgacgacccggccccg
ggcgtgggcgccgaggggccggtcgggactggccccggcgacgccaccgaccccgcatcc
gggccgccgtccccggccctggccgaggggccggtcgagccgcccttcccgggcatggtc
tcgctgttcgacgaggacgagctcgccccgagcctggtgcccgccgcgccccgccctccc
gcgttccacgacggacgtcgccgggcccgccgcgcggcggcgctcacgcacgccgggacg
atgcgccgggcgatggccgccgtgcgggccgacctggccgaccaccccggcgcccggtcg
gtcgtcgtcgcgcacgcctgggtcaccggggcggccggcagcgacagcgagcgcgacatc
agcgtcggcggcgccgcgcacgtgcccgccgccctgttcgacgggatcacctacgcggcg
ctcggccatctgcaccggccacagcgggtcctcggccgggccgacctgcgctacagcggc
tcgccgctggcctattccttctccgagacgcaggacgcgaaggcgtcgctgctcgtcgag
ctcggaccggccgggctcgcccgcgtcgaacctgtcccggtgccggtgcaccggcggatg
acgatcctgcgcggcccgctggagcagctgctcacccggctggagtacggcgagcacacc
gaggacctggtggccgcggtactgaccgacgacgcccgccccgtcgacgcgatgagccgg
ctgcgcgcccgcttcccgcacaccctggtgctgcgccacgagcccgagcacgcgcccgcc
gacgacggccggacgttcacccagcgcacccggggccgcgacgacctcgacgtggccgcc
gacttcgtcgacttcgcgcggggcacgccggccgacgaggacgaacgctccctgctcgcc
gacgcgctgaccgccgcccggctcacggccgcctggcccgacgcccgcggggaggcctga
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