Pseudofrankia inefficax: FraEuI1c_1997
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Entry
FraEuI1c_1997 CDS
T01354
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FraEuI1c_1997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fri03400
]
FraEuI1c_1997
Enzymes [BR:
fri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
FraEuI1c_1997
DNA repair and recombination proteins [BR:
fri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FraEuI1c_1997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH
Motif
Other DBs
NCBI-ProteinID:
ADP80047
UniProt:
E3IV27
LinkDB
All DBs
Position
complement(2447194..2448072)
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AA seq
292 aa
AA seq
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MTTITITPRGPFSLAAGTRFLEGFTPASYDAAPDDVLRLAFPTDDGHTSAGAAIRQAPDG
TVHADLTGGADPAAVRAQVARILSLDVDGAAFPDCVAADAVAAGLAARHLGLRPVCFPSP
YEAACWTIIGHRIRLTQAARLKATIAREHGETITVAGQPTAAFPTPSTLRTVDDLPGLSE
LKMGRLRAVAQAALDGELDAATLRALPTEEALRHLQALPGIGPFSAELILIRGAGHPDVF
PGHERRLHQAMAKAYHLDSPELGQLSRLAQRWAPFRSWVTLLLRAHATAAFA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgatcacgatcaccccccgggggccgttctcgctggcggccggtacccggttc
ctggagggcttcacgcccgccagctacgacgcggcgcccgacgacgtgctgcggctggcc
ttccccaccgacgacggccacaccagcgccggggccgcgatccgccaggcaccggacggc
accgtccacgccgacctcaccggcggcgcggacccggccgccgtccgggcgcaggtggcc
cgcatcctgtccctggacgtcgacggcgccgcctttcccgactgcgtggccgccgacgcg
gtggccgccggcctggccgcccgtcatctcgggctgcgcccggtctgcttcccgtcgccc
tacgaggcggcctgctggacgatcatcggccaccggatccggctgacccaggccgctcgg
ctcaaggcgaccatcgcccgcgagcacggcgagacgatcaccgtcgccggtcagccgacc
gcggccttccccaccccctcgacgctgcggaccgtcgacgatctgcccggcctgtccgag
ctgaagatgggccggctgcgcgccgtcgcgcaggccgccctcgacggtgagctcgacgcg
gccacgctgcgcgcgctgccgaccgaggaggcgctgcggcacctgcaggcgctgcccggg
atcggccccttctccgccgagctgatcctcatccgcggcgccggccatcccgacgtcttc
cccggccacgagcgccggctgcaccaggcgatggcgaaggcctaccacctcgacagcccg
gagctcggccagctcagccggctggcccagcggtgggcgccgttccgcagctgggtcacc
ctgctgttgcgcgcgcacgccaccgccgcattcgcctga
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