Pseudofrankia inefficax: FraEuI1c_2340
Help
Entry
FraEuI1c_2340 CDS
T01354
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FraEuI1c_2340
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fri01007
]
FraEuI1c_2340
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fri03016
]
FraEuI1c_2340
Enzymes [BR:
fri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
FraEuI1c_2340
Amino acid related enzymes [BR:
fri01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
FraEuI1c_2340
Transfer RNA biogenesis [BR:
fri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FraEuI1c_2340
Prokaryotic type
FraEuI1c_2340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
ADP80379
UniProt:
E3J096
LinkDB
All DBs
Position
complement(2873957..2875219)
Genome browser
AA seq
420 aa
AA seq
DB search
MLDKRFIRDNPDVVKQAVRVKGLDLDVDELLKLDQENRELQFAKDQALSRRKSSAKEFAK
ADAARKEELRAQSAETDAELRRLNEQQAATSERLTELMLATPTIPWEGAPVGPDESANTV
VRTWGTPPTFDFETLDHVDLAEKRGWAEFARARRVAGERAYALCGDLVLLERALHSYALD
VLRGRDFQLMSVPVLVKEAPLVGSGMLPKGRAEIYEIPADDAYLAGTAEVALVGLHSGEI
LDASRLPIRYAGISTCFRREIGSASRDVRGLLRVHQFEKVEQFVICADDLAESDRWHAEL
LGTAEAILQALGLAYEVVECSTGDMGVGKYRMNDINTWFPSLGMYRETHSCSSLKDWQAR
RANLRYRTPDGQIHFAYTLNNTAVATPRLLAAVLENFQQADATLAVPEVLRPYLGGRDTL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaagcgcttcatccgggacaacccggacgtggtgaagcaggcggtgcgcgtc
aaggggctcgacctcgacgtcgacgagctgctcaagctcgaccaggaaaaccgcgagctg
cagttcgcgaaggaccaggcgctgtcccgccgcaagtcgtccgccaaggagttcgccaag
gccgacgcggcgcgcaaggaggagctgcgcgcccagagcgccgagaccgacgccgagctc
aggcggctgaacgagcagcaggccgcgaccagcgagcggctgaccgagctgatgctggcg
acgccgaccatcccgtgggagggcgcgccggtcgggccggacgagtcggccaacacggtg
gtgcgcacctggggcaccccgccgacgttcgacttcgagacgctcgaccacgtcgacctg
gccgagaagcgtggctgggccgagttcgcccgcgcccgccgggtcgcaggcgagcgcgcg
tacgcgttgtgcggcgacctggtcctgctggagcgggcgctgcactcctacgccctcgac
gtgctgcgcggccgggacttccagctgatgtcggtgccggtcctggtcaaggaggcgccg
ctggtcggcagcggcatgctgccgaagggccgcgcggagatctacgagatcccggccgac
gacgcgtacctcgccggcaccgccgaggtggcgctggtcggcctgcactcgggcgagatc
ctggacgcctcgcggctgccgatccgctacgccggcatctccacctgcttccgccgcgag
atcggcagcgcgagccgggacgtgcgcgggctgctgcgggtccaccagttcgagaaggtc
gagcagttcgtcatctgcgcggacgacctggccgagtccgaccgctggcacgccgagctg
ctgggcaccgccgaggcgatcctccaggcgctgggcctggcctacgaggtcgtcgagtgc
tccaccggcgacatgggcgtcggcaagtaccggatgaacgacatcaacacctggttcccg
tcgctcgggatgtaccgggagacacacagctgctcgtcgctgaaggactggcaggcccgg
cgggccaacctgcgctaccggaccccggacggccagattcacttcgcctacacgctgaac
aacacggccgtcgcgaccccgcggctgctcgccgccgtgctggagaacttccaacaggcc
gacgcgacgctggccgtccccgaggtgctgcgtccctacctcggcgggcgcgacactctc
tga
DBGET
integrated database retrieval system
