Pseudofrankia inefficax: FraEuI1c_2930
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Entry
FraEuI1c_2930 CDS
T01354
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
fri
Pseudofrankia inefficax
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fri03009
]
FraEuI1c_2930
Enzymes [BR:
fri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
FraEuI1c_2930
Ribosome biogenesis [BR:
fri03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FraEuI1c_2930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ADP80955
UniProt:
E3JAA4
LinkDB
All DBs
Position
3540024..3540881
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AA seq
285 aa
AA seq
DB search
MSGTAERGPAGHDVGGRGVGGRDARGRDGGGRDGGGRGETASQEGIRLQKVLASAGVGSR
RHNEELIDAGRVRVDGKVVREQGRRVDPETAVIEVDGERVVTRTGLVHLALNKPRGVVST
MSDPEDRPTISDLLTEFGASAGLFHVGRLDVDSEGLLLVTNNGDLAHRLTHPSYQVPKTY
QVQINGPLRKETMRRLHTRVELSDGPVRVDSARIIDQVGSQILLEIVLHEGRNRIVRRMM
EEVGHPVVRLLRTEFGAVHLGTLRSGRARHLTLHEVGALHSMVGL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgggacggcagagcgtgggccagccgggcatgacgttggcgggcgcggcgtcggc
gggcgtgacgctcgcgggcgtgacggtggcgggcgtgacggtggcgggcgcggcgagacg
gcgagccaggagggcatccggctccagaaggtgctggcgtcggccggggtcgggtcgcgc
cggcacaacgaggagctgatcgacgccggccgcgtgcgggtcgacgggaaggtcgtgcgc
gagcagggccgccgggtcgacccggagaccgccgtcatcgaggtcgacggcgagcgcgtc
gtcacccggaccgggctggtgcacctggcgctgaacaagccgcgcggggtcgtgtcgacc
atgtccgacccggaggaccggccgacgatcagcgacctgctcaccgagttcggcgcgagc
gccggcctgttccacgtcggccggctcgacgtcgacagcgagggcctgctgctggtgacg
aacaacggcgacctggcccaccggctgacccacccgtcctaccaggtgcccaagacctac
caggtccagatcaacggcccgctgcgcaaggagacgatgcgcaggctgcacaccagggtc
gagctctccgacggcccggtccgcgtcgacagcgcccgcatcatcgaccaggtcggctcg
cagatcctgctggagatcgtcctgcacgagggccgcaaccggatcgtgcgccggatgatg
gaggaggtcggccacccggtggtgcgcctgctgcgcaccgagttcggcgccgtgcacctg
ggcacgctgcgttccggccgggcccgccacctcaccctgcacgaggtcggcgcgctgcac
tcgatggtcggcctctga
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integrated database retrieval system
