Pseudofrankia inefficax: FraEuI1c_3371
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Entry
FraEuI1c_3371 CDS
T01354
Name
(GenBank) GAF modulated transcriptional regulator, LuxR family
KO
K21685
LuxR family transcriptional regulator, regulator of acetate metabolism
Organism
fri
Pseudofrankia inefficax
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fri03000
]
FraEuI1c_3371
Transcription factors [BR:
fri03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
FraEuI1c_3371
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
GAF
GAF_2
Sigma70_r4_2
HTH_23
HTH_28
Sigma70_r4
HTH_30
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
ADP81380
UniProt:
E3IWQ0
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Position
complement(4146182..4147039)
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AA seq
285 aa
AA seq
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MTTTGAEPDDDRLLRRAVLELHSQLGADMSYGGLVDPRSGHLTIRFLQGNRTDRLHGLLI
PPGVGVGGQVLAHGRPVIADVRSSRRQPGRSDWAGTDEGIRAVAAVPVRRAGAIWAVMYA
ATRSRDQIGSAVSDTFVEMARAFERFLAYHSGGARGDAGGGPYVRPPAPALETLLQIEAE
LEGLTEHAGDQAVVRDRVASIRQLLQACYGYMGEATARETAFGLTPRELEVVRFIAEGHS
NAEAAKHLTVKPETVKSYLRSIMQKLGVHNRTAAVNVARRAGLLP
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacaggcgctgaacccgacgacgaccgcctgcttcgccgcgcagtcctcgag
ctgcattcccagctgggcgcggatatgtcgtatggcggtctggtggacccgcgatccggc
cacctgacaatcagattcctgcaggggaaccgcaccgaccggctgcacgggctgctcatc
ccccctggtgtgggtgtcggcggccaggtcctggcgcacggccggcccgtcatagcggat
gtccgcagcagccgtagacagccgggccgaagcgactgggccggcaccgacgagggaatc
cgggctgtcgccgccgtccccgtccgcagggccggcgcgatctgggcggtgatgtacgcg
gccacgcggtcgagagatcagatcggatcagccgtcagtgacaccttcgtcgagatggcg
cgcgcgttcgaaagattcctcgcctaccacagtggcggggccagaggggacgccggcggc
ggcccttacgtccgcccacccgcgccagccctggagaccctcctccagatcgaggcggag
ctggaggggctgaccgaacacgccggcgaccaggcggtggtgcgggaccgggtcgcgtcc
atccgccagctgttacaggcctgctatggatacatgggtgaggccaccgcccgcgaaacc
gccttcggcctgacgccacgtgaactcgaggtggtccggttcatcgccgagggccactcc
aacgcggaggccgcgaaacatctcacggtgaaaccagaaaccgtgaagtcctatctacga
agcatcatgcagaagttgggcgtccacaaccgcaccgccgccgtcaacgtggcgcgccgg
gccggcctgctgccatag
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