Pseudofrankia inefficax: FraEuI1c_3380
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Entry
FraEuI1c_3380 CDS
T01354
Name
(GenBank) hypothetical protein
KO
K10439
ribose transport system substrate-binding protein
Organism
fri
Pseudofrankia inefficax
Pathway
fri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FraEuI1c_3380
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FraEuI1c_3380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fri02000
]
FraEuI1c_3380
Transporters [BR:
fri02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
FraEuI1c_3380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
BLH_phosphatase
Motif
Other DBs
NCBI-ProteinID:
ADP81389
UniProt:
E3IWQ9
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All DBs
Position
4161299..4162486
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AA seq
395 aa
AA seq
DB search
MSEPRTRHDRLRRPRAGLRSAFAVGALAGLLLATAACGSSGSSGGTQPAAGSSAPAPAAV
ASAQAVVDQLLKPPTSLGVTDRLTKAPTGGTFVYLSCELALCQILNKNMSEAASAAGLGF
KSIPIKSADPATLIAGMQQALTLSPPPVGVSFAGLPEAVWGSQVAAFAAAGVPLIPVGAG
ETSKSPAVPAGSLNGPADITAQAKAIASYFVANSGGRGKALVLNVPDIGAFKQFTGDFSS
QVASACPGCSVKQVDITLAQTASNGVVPAVVSALQRDPSIDYVVTVEGEWTAGLVPAAKA
AGRSGIHIIGINPTSVDQQAILAGTETAFVNIPLKITSWKAVDVALRYAQKMPIADGDGA
TPYLLLTKATVTKPEDSVDAPSDYVAQFRKLWGLG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaccgcgcaccaggcatgaccggctacgccgaccgcgggccggattacgatcg
gcctttgccgtgggggccctggccgggcttctgctggcgacggccgcgtgcgggagctcc
ggctccagcgggggtacgcaaccggccgcaggctcgtcggccccggcgccggccgccgtc
gcgagcgcccaggcggtggtcgaccagctgctgaagccaccgacgtcgctcggcgtgacc
gaccgcctcacgaaggcgcccaccggcggcaccttcgtctacctgtcctgcgagctggcg
ctgtgccagatcctcaacaagaacatgagcgaggcggcgagtgcggcgggcctgggcttc
aagtccataccgatcaagtcggccgacccggcgacgctgatcgccggaatgcagcaggcc
ctcacgctgagcccgccaccggtcggtgtctcgttcgccggccttcccgaggcggtctgg
ggcagccaggtcgccgccttcgccgccgcgggcgtgccgctcatcccggttggggccgga
gagaccagcaagagccccgcggttccggcgggcagcctcaacgggcccgccgacatcacc
gcccaggcgaaggccatcgcgagctatttcgtcgcgaactccggcggccgtggcaaggca
ctggtcctcaacgtcccggacatcggagcgttcaagcagttcaccggggacttctccagc
caggtcgcgtccgcctgcccgggctgctcggtcaaacaggtggacatcaccctggcccag
acggcaagcaacggggtagtgccggccgtcgtctcggcgctgcaacgtgacccgtcgatc
gactatgtcgtgaccgtcgaaggtgaatggaccgcggggctcgtcccggccgcgaaggcc
gctggacgctcgggcatccacatcatcggcatcaatcccaccagcgtcgaccagcaggcg
attctcgccggcacggagacggcgttcgtcaacattcccctgaagatcacgtcctggaag
gccgtcgacgtcgcgcttcgctacgcgcagaagatgccgatcgcggacggcgacggggcg
acgccctacctgctgctgaccaaggcgacggtcacgaagcccgaggactcggtcgacgcg
cccagcgactacgtggcccagttcaggaagctgtggggcctcggttga
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