Pseudofrankia inefficax: FraEuI1c_3672
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Entry
FraEuI1c_3672 CDS
T01354
Name
(GenBank) ABC transporter transmembrane region
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
fri
Pseudofrankia inefficax
Pathway
fri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FraEuI1c_3672
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fri02000
]
FraEuI1c_3672
Transporters [BR:
fri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FraEuI1c_3672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_29
RsgA_GTPase
DUF87
sCache_3_2
7tm_7
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ADP81679
UniProt:
E3J1L1
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All DBs
Position
4502839..4504575
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AA seq
578 aa
AA seq
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MLIRVLRAHLGPYRGQIAALVVLQLAATFVMLYLPTLNADLIDHGVVEGDTGYIVSIGGI
MLALTFGQVVCACGAAFFSARTAMAFGRDVRASVFNRVQSFSAREIGHFGAPSLITRATN
DVQQVQMLALLSGTMMISAPFMCIGGIVLAINQDAKLSLLLVAVVPILGIVISLIIRRMH
PLGRAMQERLDTVNRVLREQLHGLRVIRAFVRDTHERDRFAVANAELTDTSVRYGRLMAL
MFPLVFAAVNISSIAVIWFGAHRIDSGGMQIGALTAFLSYLMQILMSVMMATFMFAMIPR
AAVCAERICEVLDTETTLLAPENPVTELDRHGELELRGVGFRYPGAEASVLRDISLAARP
GQVTAIIGSTGVGKSTLMSLIPRLSDVTEGTVLVDGVDVRDIDPALLAKTVALVPQKPYL
FSGTVASNLRYGDPDATDDELWRALETAQAKGFVEAMPDGLATSISQGGTNVSGGQRQRL
AIARALVRRPEVYLFDDSFSALDYATDAALRAALARETAAATVVIVAQRVATIRDADQII
VLDAGQIVGVGTHHELMADNETYREIVLSQLTEQEAAA
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgctgatccgagtcctgcgggcccacctcgggccctaccgcggccagatcgcggcgctc
gtcgtgctccagctggccgccaccttcgtcatgctctacctgccgacactgaacgccgac
ctgatcgaccacggcgtcgtcgagggggacaccggctacatcgtgtccatcggcggcatc
atgctcgcgctcaccttcgggcaggtcgtgtgcgcctgcggcgccgcgttcttcagcgcc
cgcaccgcgatggccttcggccgcgacgtccgcgcctcggtgttcaaccgggtccagtcg
ttctccgcccgcgagatcggccacttcggcgccccgtcgctgatcaccagggcgacgaac
gacgtccagcaggtccagatgctcgccctgctgtccggcacgatgatgatctcggcgccg
ttcatgtgcatcggcgggatcgtcctggcgatcaaccaggacgccaagctgtcgctgctg
ctggtcgccgtcgtcccgatcctcggcatcgtcatcagcctgatcatccggcggatgcac
ccgctgggccgggcgatgcaggaacggctcgacacggtcaaccgggtgctgcgcgagcag
ctgcacggcctgcgggtgatccgcgcgttcgtccgcgacacccacgagcgtgaccggttc
gccgtcgcgaacgccgagctgaccgacacctcggtgcgctacggccggctgatggcgctg
atgttcccgttggtgttcgccgcggtgaacatctcctcgatcgcggtgatctggttcggc
gcgcaccggatcgactccggcggcatgcagatcggcgcgctgaccgcgttcctgtcctac
ctgatgcagatcctcatgtcggtgatgatggcgacgttcatgttcgccatgatcccgcgc
gccgcggtgtgcgccgagcggatctgcgaggtcctcgacaccgagacgacgctgctcgcg
ccggagaacccggtcaccgagctggaccgccacggcgagctggagctgcgcggcgtcggg
ttccgctacccgggcgccgaggcgtccgtgctgcgcgacatcagcctcgccgcccggccc
ggccaggtcaccgcgatcatcggctccaccggcgtgggcaagtcgacgctgatgtccctg
atcccccggctgtccgacgtcaccgagggaacggtgctcgtcgacggcgtcgacgtccgt
gacatcgacccggcgctgctcgcgaagaccgtcgccctcgtgccacagaagccgtacctg
ttctccggcacggtcgcgtccaacctgcgctacggcgacccggacgccaccgacgacgag
ctgtggcgcgcgctggagaccgcgcaggcgaaggggttcgtcgaggcgatgcccgacggg
ctcgcgacgtcgatctcccagggcggcacgaacgtctccggcgggcagcgccagcgcctc
gcgatcgcccgcgcgctcgtccgccgccccgaggtctacctgttcgacgactcgttctca
gcgctggactacgccaccgacgcggcgctgcgcgcggcgctggcccgggagaccgccgcc
gcgaccgtggtgatcgtcgcccagcgggtcgcgacgatccgcgacgccgaccagatcatc
gtcctcgacgccggccagatcgtcggcgtcggcacccaccacgagctgatggccgacaac
gagacctaccgggagatcgtgctgtcccagctcaccgaacaggaggcggccgcatga
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