Pseudofrankia inefficax: FraEuI1c_3767
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Entry
FraEuI1c_3767 CDS
T01354
Name
(GenBank) Exodeoxyribonuclease V
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FraEuI1c_3767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fri03400
]
FraEuI1c_3767
Enzymes [BR:
fri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FraEuI1c_3767
DNA repair and recombination proteins [BR:
fri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FraEuI1c_3767
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
HHH_RecD2
AAA_11
Viral_helicase1
SH3_13
AAA_22
NAT10_TcmA_helicase
AAA_16
UvrD-helicase
TraI_hel_assoc_N
HHH_5
AAA
Motif
Other DBs
NCBI-ProteinID:
ADP81774
UniProt:
E3J2W3
LinkDB
All DBs
Position
4607163..4609349
Genome browser
AA seq
728 aa
AA seq
DB search
MPEASSPVPDPLFAAFCAAGLWPGLGRTSAERLPAAGIRSPADVDLARLSAVEGMTGPRA
RRLLDSFRASTGRYEVAGLLADASLPVRLARGVSDELGASAADELRADPWALLAGGEADL
THADRLARSMGLGRDDPRRGPGVLVHLLTQAASRAGDTAGPVEALLTGAGREGVPDPAAA
LESAVEDGRLLPVGDRVGLERYAMAEQAVADGVERLLATAEPLRPGEPRRRRAKPPGVAA
QAGTDAAADDDESHQAAELDFGLGDDSADEADHESDEELAGGAQGADGGPAALADPSPAP
GGDDGVDEAVAGLDEVQLAAARLALESGVSVLTGGPGTGKSRTVAAVVRLAQAAGAEVAL
AAPTGRAAKRLEELCDTPASTLHRLLGAQGKGGGFARGEHYPLDAELVVVDEASMVDAEL
AAALIEALADGTHLLVVGDPAQLPSIGPGQLLADLIESGVVPVTELSRLYRQSAGGAIAQ
LATAVRGGELPPPAGGEDREVVVVAARSAAEAAHRVVQLVTDSIPRVLGIVPADVQVVTP
VHAGPAGTVALNAALKDRLNPGPGKVSGFDVGDRVVATANHLDVGFANGEIGVVTKLADR
GGLLVTFPGGTLEVPATALGDLRHGWAVTVHRAQGSEWPAVIAVFPPEAGRMLNRPLVYT
AITRARGHLSVVCVNGPALRQAVRSAGGRRRVTLLAPLLAGAELGEPDGDDDERDAAGAP
LRETEPVG
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgccggaggcgtcctcacctgtccctgacccgctgttcgccgcgttctgcgcggcgggg
ctgtggccggggctcgggcggaccagcgccgagcggctgcccgctgcgggaatccgctcc
cccgccgacgtcgacctggccaggctgtcggccgtcgaggggatgacggggccgcgggcc
cgccggctgctggattcgttccgcgcgtcgacgggccgttacgaggtcgccggcctgctc
gccgacgccagcctgccggtgcggctcgcccggggggtcagcgacgagctcggcgcctcg
gcggccgacgagctgcgcgccgacccgtgggcgctgctcgccggcggcgaggcggacctc
acccacgccgaccggctggcccgctcgatgggcctcggccgcgacgacccgcggcgcggg
ccgggggtgctcgtccacctgctcacccaggcggcgtcgcgcgccggtgacacggccggg
ccggtcgaggccctgctgacgggcgcgggccgcgagggcgtgcccgacccggcggcggcg
ctggagagcgcggtcgaggacgggcggctgctgcccgtcggcgaccgggtcgggctggag
cgctacgcgatggccgagcaggcggtcgccgacggcgtggagcggctgctggccacggcc
gagccgctgcgccccggcgagccacggcgccgccgggcgaagcctccgggcgtggccgcc
caggccggcaccgacgcggcggccgacgacgacgagagccaccaggccgccgagctcgat
ttcgggctgggcgacgactccgcggacgaggccgaccacgagagcgacgaggagctggcc
ggcggcgcgcagggcgcggatggcggcccggcggcgctggccgacccgtcacccgcgcca
ggcggtgacgacggggtggacgaggccgtcgcgggcctcgacgaggtgcagctggcggcg
gcgcggctcgcgctggagtccggcgtcagcgtgctcaccggcggaccgggcaccgggaag
agccggaccgtcgccgccgtcgtccggctcgcccaggcggccggcgccgaggtcgcgctg
gccgcgccgaccggccgggccgccaagcgcctcgaggagctgtgcgacaccccggccagc
acgctgcaccggctgctgggcgcccagggcaagggcggcgggttcgcccgcggcgagcac
tacccgctcgacgccgagctggtcgtcgtcgacgaggcgtcgatggtcgacgcggagctc
gccgccgcgctgatcgaggcgctcgccgacggcacccacctgctcgtcgtcggcgacccg
gcgcagctgccgagcatcggccccggccagctgctcgccgacctgatcgagtccggggtc
gtgccggtcaccgagttgagccggctctaccggcagtcggccggcggggcgatcgcgcag
ctcgcgacggcggtgcgcggcggcgagctgccaccgccggccggcggggaggaccgggag
gtggtcgtcgtcgccgcgcgctcggccgccgaggccgcgcaccgggtcgtgcagctggtc
accgactcgatcccgcgggtgctggggatcgtgccggccgacgtgcaggtcgtcaccccg
gtgcacgcgggcccggccggcacggtcgcgctgaacgccgccctgaaggaccggctgaac
ccgggccccggcaaggtcagcggcttcgacgtcggcgaccgggtcgtggcgaccgccaac
cacctcgacgtcgggttcgccaacggcgagatcggcgtcgtcacgaagctcgcggaccgg
ggcggtttgctcgtgacgttcccgggagggacgctggaggtgccggcgaccgcgctcggc
gacctgcgccacggctgggccgtcacggtgcaccgggcgcagggcagcgagtggccggcg
gtcatcgccgttttcccaccggaggccggccggatgctcaaccgcccgttggtctacacc
gcgatcactcgcgcccgcgggcacctgtcggtcgtctgcgtgaacggccccgcgctgcgc
caggcggtgcgctcggcgggcgggcgacggcgggtgacgttgctcgcgccgctgctggcc
ggcgccgagctgggcgagcccgacggcgacgacgacgagcgggacgcggcgggggcgccc
ctgcgcgagaccgagccggtcgggtga
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