Pseudofrankia inefficax: FraEuI1c_4026
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Entry
FraEuI1c_4026 CDS
T01354
Name
(GenBank) NB-ARC domain protein
Organism
fri
Pseudofrankia inefficax
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
EAD1
ABC_tran
MMR_HSR1
RsgA_GTPase
NACHT
DUF87
Motif
Other DBs
NCBI-ProteinID:
ADP82028
UniProt:
E3J7Y0
LinkDB
All DBs
Position
complement(4899134..4904632)
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AA seq
1832 aa
AA seq
DB search
MERLSEIEIRELARRFADAGSATHLLAATGWSAELVPSWRARNALEFWQEVAAELEHGAV
RDGRRRLLTAAAARCPDSSVFAAGWEATRPFRAVPSRDLLPVVPAHFVARTADAAAVRDL
LCARPPGQVVAIVGMGGVGKSTLAAALVQDANVVEKFPDGIAWVAIGREPILAEKIADVL
AAFADHAPVPAVAEGTRRLRGVLDGARALIVLDDVWDVVVLEAFRVPPGVRLLVTTRSKD
ALFGDAALHELTMADTETSRRVLASYARCEVADLPAESDGIVRRCGGLVLALALVGAMVG
TGRRWRTVAERLSRADLAAIKSRFPGYPHPTLLAALEASVNAFPEADALRFRELAVVEAR
GYLPAAAVAALWRETGGLDELDAEDLLDLFARHSLVRIDPVSQTVQLHDLLIDYARITLP
DRQRRAAHRLLSQWLMQRWGGLSTGLRQIPEAAAFDEVDHYALAATVTHLLAADDAASVD
RLLAAERSTAGGRAENVWYTVHEGLGSTAAYLATIRAAWNDAQTRPHPDAEVFVRLAGYA
LLIGSVTSMAANIPPPLLIHAVKAGLWPPPRALAYAQAIPDPAARAAALTGLADDLAPKQ
RASLLGAALAAVAAIGRPDQQVTALTELVPHLTASPAGTLQARAVALASAVDRPDHRVAA
LVGLAPCLPADLLREALETATASVRSDYRETALVGLAPYLSGGLLDQALVIAGAIERPLS
RVAALTALAPRVAVERRGPLLAAVLAAVGSVTWPNDQAAALAAIAPYLSTDLLREATVLA
REITTPAARASALTDLAQQVTEDGRGPVLAEALAAVLAIDRLNERHRALASLVPHLPGEL
IGPVLTAAAGTGPDARAVTLTELLGHLPPDYRAPVVQQALAAVAVIGPAGARVAELATLA
PYLPAEQRAPVLADGLTTVDSLENPDEQIATLTALLPSLPSDHRGRLVRRALATASAIDQ
PDRRAVAMGILAPHLPPDLLGDALALALAVDEPVDLAATLIHLAPYLAADQLPEAVAAAR
AIGPRAARVSALTALIPRLPVDQRDALLRTTLGAAAGLEPPERRATALAELAPHLPPTQL
VEAAAVARSINRPAARLTALTALAPHLPTWQRTAALADALAAMADRSAAAGPSDDAVRDA
TKAIDTSTGNARALSRLAPLLPPNLLRRALGVAKAISRPTARVSALAGLAAYLPADTRDV
AVAEALVSTTKIDLPAERTTALASLAAHLPTAVLVSALASASAGDRPSDRIATLIGLLPS
LTAAQRGPVLTEALDAVTAISSPHSRAAALTALGPHLADPRRGQALLLAHDSAASITAPA
SRATALTALVPLQPADQQEPLLAEALEAVALAWPTDRVAALVHIAPYLRSRRGLLAVALA
TATSIDQPALRAAALAGVAPFLPADLLAQALSSAVAIDQAHDRVAALGGLAPHLPEEQRG
PLLAEALAAATLIDQPRMRADSLQALAPHLPPVLLGNAFDAAVTIDRSDQRAAALRWLAP
HLPAELLARTLDAASRLEDPTDRAAVLAGIAPHLPDRLISAARDLAATIVPAHRRTAALS
ALAARLPASERRWVLGDAAGAAAAIPWPADRLVVLLTLAPLVPAEQRGRMLAEALKAGMD
LTWPRGQVEALELLAPHLPPDLLAQALAAAVTLDQPHDRATALRTLAPHLPADLVRGARR
AATAIGPPDARAAALTGLVPYIPAGERGPLLDDALAAAMAIEQPAIRAAGLTALIPILNT
EQRGPLLTRALAAASSIDEPDQRAAALVQLTSHLPAGERRHVLAQALDSAALSSRAAVVT
VILDVLALGLIDDVSAGTAITATLLRIQRCLP
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
gtggaacgcctctcggagatcgagattcgggagctcgccaggcgtttcgcggatgccgga
tcggccacgcacctgttggcggccaccggctggtctgccgagctggtcccgtcgtggcgg
gccaggaacgcgctcgagttctggcaggaggtggccgccgagctggagcacggcgcggtc
cgggatggccggcgtcggctgttgacggctgcggcggcccgttgtccggatagcagcgtg
tttgctgctggctgggaggcgacgcgtcctttccgggcagtgccctcgcgcgatctccta
cccgtggtgcccgcacatttcgtcgccagaaccgcggacgccgccgccgtgcgcgatctg
ctgtgcgcgcggccgcccgggcaggtcgtggccatcgtcggcatgggcggcgtcgggaag
tcgacgctggccgccgcgctcgtccaggacgcgaacgtcgtcgagaagttccccgacggc
atcgcctgggtcgccatcggacgcgagccgatcctcgccgagaagatcgccgatgtgctc
gcggctttcgcggaccatgcgccggtcccggccgtcgccgagggcacccggcgcctgcgt
ggcgtcctggacggtgcccgcgcgctgatcgtgctcgacgacgtgtgggacgtcgtcgta
ctggaggctttcagggtccctccgggggtgcggctcctggtgacgacgcgttcgaaggac
gctctgttcggcgatgcggcgcttcatgagctgacgatggcggacacggagacgtcgcgg
cgggtgctggcctcctacgctcgctgcgaggtcgccgacctgccggccgagtcggacgga
atcgtgcgccggtgcggcgggctcgtgctggcgctggcgctggtcggcgcgatggtgggc
accgggcggcgctggcggaccgtcgcggagcggctgagccgtgccgacctcgccgcgatc
aaaagccgattccccggctacccgcatccgacgctactggccgcgctggaggcgtcggtc
aatgcctttcccgaggccgacgcgctgcggtttcgcgaactggcggtggtcgaggcccgg
ggctatcttccggcggcggccgttgcagcgttgtggcgggaaacgggtgggctcgacgag
ctcgacgccgaggatctcctcgacctgttcgcccgacactccctggtgcgcatcgacccg
gtctcgcagacggtccagctgcatgacctactgatcgactatgcccggatcaccctgccc
gaccgtcaacgacgtgcagcccacaggctgctcagccagtggctgatgcaacggtggggt
ggtctctcgaccgggcttcgccagatacccgaggccgcggcgttcgacgaggtagatcac
tatgccctcgccgcgaccgtcacccatctgctggccgccgacgatgccgcgtcggtcgac
cggctcctggccgccgagcggtcgacagccggcggacgggccgagaacgtctggtacacc
gtccacgagggactgggcagtacggccgcctacctggcgacgatccgcgcggcctggaac
gacgcgcagaccaggccgcacccggacgccgaggtcttcgtccgtctggctggctatgcg
ctgctcatcgggtcggtcaccagcatggccgcgaacattccccctccgctgctgatccac
gccgtgaaggccgggctctggccgccgcccagggcgctcgcctacgcccaggcgattccc
gacccggctgcccgggccgccgccctgaccggcctggccgacgatctggcgccgaaacaa
cgtgcctcgctgctcggtgccgccttggccgccgtggcggccatcggccgtccggatcag
caagtcacggcgctgaccgagctggtcccgcatctgaccgccagtccggcgggcacgctc
caggcgagagccgttgcgctcgctagcgccgtcgaccgtccggaccatcgagtagcagcg
cttgtagggctcgcgccctgtctgcccgccgacctgctgcgcgaggcgctggagacggct
actgcttccgtgcggtcggactaccgggaaaccgctctggtcggcctggcgccctacctg
tccggcggactgcttgatcaggcgttggtgatcgctggggccatcgagaggccgctgtct
cgtgtagcggcgctgacggcgttggccccgcgagtggcggtcgagcggcggggcccgctg
ctcgccgccgtgctcgccgcggtcggatctgtcacctggccgaacgaccaggcggctgcg
ctggcggcgatcgccccgtacctgtcgactgatctcctccgcgaggcaacggtccttgcc
agagagatcaccacgccagcagcgcgcgcgagtgcgctgacggaccttgcgcagcaagtg
accgaggatggccgcgggccggtgctcgccgaagccttggccgccgtcctcgccatcgac
cggctcaacgagagacaccgcgcgctcgccagcctggttccgcacctgcccggcgagctg
atcggcccggtgctcacggcggccgcgggcaccggacccgacgcccgagccgtgaccctc
accgagttgctgggtcacctgccgcccgattaccgcgcgcccgtagtccagcaggcgctc
gcggcggtcgccgtgatcggcccggccggcgccagagtggcggaactcgccaccttggcg
ccctatttgcccgccgagcaacgtgcaccggtgctcgccgacggtctcaccaccgtcgat
agtctcgagaacccagacgagcaaatagcgacgctgaccgccctgctgccgagcctgccc
tctgaccaccgcggccgcctcgtgcggcgcgcgcttgcgaccgcgagcgcgatcgaccag
cccgaccgtcgggccgtcgccatgggcatcttggcaccgcacctcccgccagatctgctc
ggtgacgcgctggcgctggcgctggccgtcgatgagcccgtcgacctcgccgccacgctg
atccacctggctccgtatctggctgccgatcagctccccgaggcagtcgcggcagcacgc
gcgataggcccgcgggccgcccgcgtgtccgcgctcaccgcgctgatcccgcggctaccg
gtcgaccagcgcgacgctctgctgcgcacgacgctgggcgcagcggccggcctcgagccg
cctgaacggcgcgcgaccgcgctcgccgagctggccccgcatctgccgccgacgcagctc
gtcgaagccgcggcggtggcgcggtcgatcaacaggccggcggcccgtctcacggcgttg
accgcgctggccccccatctgcccacctggcagcgcacagcagcgctcgcggacgcgttg
gcggccatggccgaccggtccgcggcagccgggccctcggatgacgcggtccgtgacgcc
accaaggcgattgacacctcgaccggcaacgcgagggcgttgtcgaggcttgcccccttg
ctgccaccgaacctgctccgccgcgcgctcggcgtcgccaaggccatttccaggcctacc
gcacgcgtctcagcgctggctggactggccgcatatctcccggcggatactcgcgacgta
gccgtcgccgaggcgctcgtcagcacgacgaagatcgacctaccggccgaaaggaccacc
gcgctcgcgtctctcgcggcgcatctgcctactgccgtcctggtgtcggcgctcgcctcc
gccagcgcgggcgaccgaccgtccgaccgcatcgcgacgctgatcgggctacttccgagc
ctcacggccgcccagcgcgggccggtgctcaccgaagcgctcgacgctgtcacagccatc
tcgtcgccgcacagccgcgccgcggcgctgacggccctcgggccgcatctcgccgacccg
cggcgaggccaggcgctcctgcttgctcacgacagcgccgcttcgatcacggcgccggcc
tcccgagcgacagcgctgacggcgctggttccgttgcagcccgctgaccagcaggaaccg
ctgctcgccgaggcgctggaagccgtcgctctcgcctggccgaccgaccgcgtggcggcg
ctcgttcacatcgctccctacctgcgctcccgtcgaggactgctcgccgtggcgttggct
accgccacttccatcgaccagccggcgctgcgcgccgccgcgctggccggggtggctccg
tttcttcccgccgacctgctcgcacaggcactcagctccgccgtcgccatcgaccaggca
catgaccgggtggcagcgctcggcggcctcgccccgcacctgcccgaggaacaacgcggc
ccgctgctggccgaggcgctcgccgccgccaccctgattgaccagccgcggatgcgcgcg
gactcgcttcaggcgttggcaccgcatctaccccccgtcctcctcggcaacgccttcgac
gccgctgtcaccatcgaccggtccgaccagcgggcggcggcgctccgctggctggctccg
cacctgcctgccgaactgctcgcccgcacactcgacgcggcgtcccgcctggaggacccg
accgaccgggcggccgttctggcagggatcgcgccgcaccttcccgacaggctgatcagc
gcggcccgcgacctcgccgcgaccatcgtcccggcccaccgccgcaccgctgctctcagc
gcgctcgccgcccgcctaccggccagcgaacgccgatgggtcctcggtgacgccgccggg
gctgccgcggcaatcccctggccggccgaccgcctggtggtgctgctcacgctcgcgccg
ctcgtgcccgctgagcagcgtggtcggatgctcgcggaggcattgaaggccggtatggac
ctcacctggccgcggggccaggtcgaggccctggagttgctggccccgcacctgcctccc
gacctactcgctcaggccttggccgcagccgtcacccttgaccagccgcacgacagggcg
acggcgctgcggacactggccccgcacctgcctgccgacctggtccgcggtgcacgacgc
gccgcgacagccataggcccgccggacgcacgggcagcggcactgaccggcctcgtgccc
tacatacccgccggagaacgtggaccgctccttgacgacgcgctcgccgcggcgatggcc
atcgaacagccagccatccgtgccgctgggctgacggcgttgatccccatactcaacacc
gagcagcggggtccgcttctcacccgcgcgctggccgcggcgtcgtcgatcgacgagccg
gaccagcgagcggcggccctggtccagctcacctctcacctgcccgccggggagcgccgc
cacgtcctcgcacaggctctggactcggccgcgctgtccagcagagccgccgtcgtcacg
gtcatcctcgatgtcctggccctcggcctcatcgacgacgtgtccgcgggcacggccatc
accgcgacgctgctacgcatacaacgctgcctgccttga
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