Pseudofrankia inefficax: FraEuI1c_4216
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Entry
FraEuI1c_4216 CDS
T01354
Name
(GenBank) hypothetical protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
fri
Pseudofrankia inefficax
Pathway
fri02010
ABC transporters
fri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FraEuI1c_4216
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FraEuI1c_4216
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fri02000
]
FraEuI1c_4216
Transporters [BR:
fri02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
FraEuI1c_4216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
CzcB_C
Motif
Other DBs
NCBI-ProteinID:
ADP82215
UniProt:
E3JAM3
LinkDB
All DBs
Position
complement(5115950..5117191)
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AA seq
413 aa
AA seq
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MFPGRKVLASVVATAAVAATVAGCGGSSAGPAASGGSQSPLTRTVTIGVLVDVTGPAAAG
NKSAVNGVKAGVRYASRNGYTVKYVLADTQTSPATALTAAQKLVTQDHVTAVFAQSALTF
AAAPYLAAHNIPVIGGSGDGTEWATTPTMFPVLGAIHQNKVASTLGQFFKARGVTTVGTI
GYNLPQSAVATKSAAESAKAAGLKVGYVNAQFPLGGTDVGPATIAMKAAGVDGVTASTAA
NTSFALITGLREQGVALKAALLPVGYGGDLLAAGPGATGAAQDVYFSTAYEPVEMQTAAT
KQFAADLSATGTTGSPTYAAYNGYASIGLLVRGLTDAGGTPSSATLITALSEVHDWNALG
LLGTHRVDINDRENIVAGADNCLWITQFKGSTFQLVAGADPICGTVLKGVTVS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccggtcggaaagtactggcgtcggtggtcgcgacagcggctgtggcggccact
gtcgccggatgcgggggatcgtcggcggggccggccgcttctggcggcagccagagtccc
ctcacgagaaccgtgacaatcggcgttttagtggatgtcaccggcccggcggccgcgggg
aacaagtcggccgtgaacggcgtgaaagccggggtccggtacgcctcgcggaacggctac
acggtcaaatacgttctcgccgacacccagacgtctccggcgacggcgctgaccgccgcc
cagaagctggtgacgcaggaccacgtgacggcggtcttcgcccagtccgcgctgacgttc
gccgcggcaccctacctggcggcccataacattcccgtgatcggtggctccggagacggc
acggagtgggccacgaccccgaccatgttcccggtgctcggcgcgatccaccagaacaag
gttgcctcgaccctggggcagttcttcaaggcgcgaggtgtcaccaccgtaggaacgatc
ggctacaacctgccgcagtccgcggtcgccaccaagtccgcggcggagtcggccaaggcc
gccggcctgaaggtcggctacgtcaacgcgcagttcccgctcggcggcaccgatgtcggc
ccggccaccatcgcgatgaaggccgccggagtcgacggcgtgaccgcctcgaccgcggcc
aacacatccttcgcgctgatcaccgggctgcgcgagcagggcgtcgcgctgaaggccgcg
ctgctgccggtcggctacggcggtgacctgttggcagcagggccgggcgcgaccggcgcg
gcccaggacgtgtacttctcgacggcctatgaaccggtcgagatgcagaccgcggccacg
aagcagttcgcggccgacctgagcgcgacgggaaccaccggctccccgacctacgcggcc
tacaacggctacgcctccatcggcctgctcgtccgcggcctcaccgacgcaggcggcacg
cccagctccgcgacactgatcaccgcgctgtccgaggtccacgactggaacgccctcggc
ctgctcggtactcacagggtcgacatcaacgaccgggagaacatcgtcgccggtgccgac
aactgcctgtggatcacccagttcaagggcagcacgttccagctggtcgcgggcgccgac
ccgatctgcggcacggtgctcaagggcgtgaccgtctcctga
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