Pseudofrankia inefficax: FraEuI1c_4219
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Entry
FraEuI1c_4219 CDS
T01354
Name
(GenBank) transcriptional regulator, LysR family
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
fri
Pseudofrankia inefficax
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fri03000
]
FraEuI1c_4219
Transcription factors [BR:
fri03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FraEuI1c_4219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PEP-CTERM
Motif
Other DBs
NCBI-ProteinID:
ADP82218
UniProt:
E3JAM6
LinkDB
All DBs
Position
5118961..5119896
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AA seq
311 aa
AA seq
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MDRARTTDLTVARDLTIAQLRSVLAVAETGSFTAAAARTLLSQPALSRTVQDVERTVGTR
LFDRTTRSVTPTTQGREFLAVARDIVGGFDDGLGRFAAYVDGRSGTLHVTALPSLAATVL
PDVAAAFAAERPQVGVRVLEGNASQVLRQLHDGRADLALTEDPGQVRGLRVQAVGEDEMI
AIVPPGHELQAAGRTTWKQLARYPFIAIESGTSLRRLADDAFARAGAAPTHRIETTSVAT
AGGLVASGFGVSAVTRAVLPLVAFAQTAVVPIDEPAIARSIALVHPEVPQPSALTMAFAA
AVTAALRRRSG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgcacgcacgacagacctcacggtcgcgagggacctcacgatcgctcagctg
cgatctgtgctcgctgtcgccgagaccggatctttcaccgcggcggcggcacggacgctg
ctcagccagccggcgctcagccggaccgtgcaggacgtcgagcgcaccgtcgggacgcgc
ctgttcgaccgcacgacgcgctcggtcacccccaccacccaggggcgcgagttcctcgcc
gtcgcccgcgacatcgtcggcggcttcgacgacggcctcggccgtttcgccgcctacgtc
gacggccgcagcggcaccctgcacgtcaccgccctgccgtcgctcgcggcgaccgtcctg
cccgacgtcgccgcggccttcgccgccgaacggccccaggtgggcgtccgcgtcctggaa
ggcaacgcctcccaggtcctacggcagcttcacgacggccgcgcggacctcgcgctcacc
gaggaccccggccaggtccgcggcctgcgcgttcaggccgtcggcgaggacgagatgatc
gccatcgtgccgcccggccacgagctgcaggccgccggccgcaccacctggaaacagctc
gcgcgttatccgttcatcgcgatcgagtcgggcaccagcctgcgccgcctcgccgacgac
gcgttcgcccgcgccggagccgcgcccacgcaccgcatcgagacgacgtccgtcgcgaca
gctggcggcctcgtcgcctccggcttcggcgtctcggccgtcacccgcgccgtgctgccc
ctggtcgccttcgcccagacagcagtcgtccccatcgacgagccggccatcgcgcgatcg
atcgcgctcgtccacccggaagtcccccagccgtcggccctcaccatggccttcgccgcc
gcggtaaccgccgccctacggcgccggtccggctag
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