Pseudofrankia inefficax: FraEuI1c_4339
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Entry
FraEuI1c_4339 CDS
T01354
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri00730
Thiamine metabolism
fri01100
Metabolic pathways
fri01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
FraEuI1c_4339
Enzymes [BR:
fri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
FraEuI1c_4339
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ADP82338
UniProt:
E3JD54
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All DBs
Position
complement(5310229..5311944)
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AA seq
571 aa
AA seq
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MERSAHPTPVSVPLPGSRRTYLTGPDGGLRVPMREVALSNGDSVVLYDTSGPYTDPDVLV
DVHRGLAPTRAAWIDARGDTAETGARPARRALPGRAVTQLGYARRGEITREMEFVAVREG
LDPAFVRAEIAAGRAVLPANVNHPESEPMAIGRDFLVKINANIGNSAVASSIEEEVEKMV
WATRWGADTVMDLSTGRDIHTTREWILRNSPVPVGTVPIYEALEKAGGRAEDLSWELYRD
TVIEQAEQGVDYMTVHAGVLLRHVPLTAHRRTGIVSRGGAILAAWCLAHHEENFLYTHFA
ELCEILRGYDVTFSLGDGLRPGSIADANDAAQLAELATLGELTTIAWEHDVQVMIEGPGH
VPLHKIKENVDLQRELCHDAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWHGTAMLCYVT
PKEHLGLPDRDDVKAGVIAYKIAAHAADLAKGHPGAQSWDDALSQARFDFRWTDQFHLAL
DPETAQAFHDETLPAAPAKSAHFCSMCGPHFCSMKITRDVRRHADEQGLISADAVEAGLR
AKAAEFTAAGSRLYLPAPATAAGPAPTEPRT
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggagcgttccgctcacccgacccccgtttccgtgcccctgccgggaagccggcggacc
tatctgaccgggcccgatgggggcctgcgcgtcccgatgcgggaggtggcgctgtccaac
ggcgactcggtggtcctctacgacacctcggggccgtacaccgaccccgacgtgctcgtc
gacgtccaccgaggactcgcccccacccgcgcggcctggatcgacgcccgcggcgacacg
gccgagaccggcgctcgcccggcgcgccgggcgctgcccggccgggccgtcacccagctc
gggtacgcccgccgcggggagatcacccgggagatggagttcgtcgccgtccgggagggg
ctggaccccgcgttcgtccgcgcggagatcgccgccgggcgggcggtgctgccggcgaac
gtcaaccatcccgagtccgagccgatggcgatcggccgcgacttccttgtgaagatcaac
gccaacatcggcaactcggcggtcgcctcctcgatcgaggaggaggtggagaagatggtc
tgggcgacccgctggggcgcggacaccgtcatggacctctcgaccggccgcgacatccac
accacccgggagtggatcctgcggaactcgccggtgccggtcgggaccgtgccgatctac
gaggcgctggagaaggccggcgggcgggccgaggacctgagctgggagctgtaccgcgac
acggtgatcgagcaggcggagcagggcgtcgactacatgacggtccatgccggcgtactg
ctgcgccacgtcccgctgacggcgcaccggcgcaccgggatcgtctcccgcggcggggcg
atcctggcggcctggtgcctcgcgcatcacgaggagaacttcctctacacccacttcgcg
gagctgtgcgagatcctgcgcgggtacgacgtcaccttctccctcggcgacgggctgcgg
cccggctcgatcgccgacgcgaacgacgccgcccagctggccgagctggcgaccctcggg
gagctgacgacgatcgcctgggagcacgacgtccaggtcatgatcgaggggccgggccac
gtgccgctccacaagatcaaggagaacgtcgacctgcagcgcgagctgtgccacgacgcg
ccgttctacacgctcggtccgctgaccaccgacatcgcgccgggttacgaccacatcacc
tccgccatcggcgccgcgatgatcggctggcatggcaccgcgatgctctgttacgtcacc
cccaaggagcatctgggtctaccggaccgagatgacgtcaaggcgggcgtcatcgcctac
aagatcgcggcacacgccgccgacctcgccaagggccacccgggggcgcagtcctgggac
gacgccctgtcgcaggcccgcttcgacttccgctggaccgaccagttccacctggccctc
gatccggagaccgcccaggccttccacgacgagacgctgccggccgcgcccgcgaaatcc
gcccacttctgttcgatgtgcgggccgcacttctgctcgatgaagatcacccgtgacgtc
cggcgccacgcggacgagcagggcctcatctccgccgacgccgtcgaggcgggcctgcgc
gccaaggccgccgagttcaccgccgccggctcccgcctctacctgcccgcccccgccacc
gcggccggcccggccccgacggaaccccgaacctga
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