Pseudofrankia inefficax: FraEuI1c_4412
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Entry
FraEuI1c_4412 CDS
T01354
Name
(GenBank) transcriptional regulator, LysR family
KO
K19338
LysR family transcriptional regulator, nitrogen assimilation regulatory protein
Organism
fri
Pseudofrankia inefficax
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fri03000
]
FraEuI1c_4412
Transcription factors [BR:
fri03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FraEuI1c_4412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ADP82408
UniProt:
E3IU71
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Position
5397562..5398506
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AA seq
314 aa
AA seq
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MDTHRLNYFLRIADEGSINRAASVLGIAQPALSRQLRLLEEDLGVTLFLRTARGVQLTDE
GERLRAMTAAPLRQLELAMQYAGSPLARVERGLHIGMLPSVANIFAAPLLGSLSAAFPKV
TFQVTTASVDEIVDGMMKGTVDIGLIVPTSDGRLFHQHLAVEDLVIVGAAASDLQADRAI
PFRDLADLPLILPVSQPGIRNSLESAALRLEMKLSSRFSTDSLQVMKDLIEAGHGYGVLP
LSACGAEMAARRLRYAPLREPALSQQIGSAASTHLELPRGFAIRVGAMIREEADQLIASG
AWNARMLPPRSVDE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtggacacgcaccgccttaattacttcctgcgtatcgccgacgagggatcgatcaaccgg
gccgccagcgtcctgggtatcgcacagccggcactgagtcgccagttgcgccttctcgag
gaggatctcggcgtcacgctgtttctccggactgcccggggcgtgcagctgacggacgag
ggagaacgcctccgcgcgatgacggccgcgccgctgcgccagctcgaactcgccatgcag
tatgccggttcacccctggcacgggtggaacgcggcctccatataggaatgctgccgtcc
gtcgccaacatcttcgcggcgccgctgctcggcagcctcagcgcggcgttcccaaaggtg
acctttcaggtgacgaccgccagcgtcgacgagatcgtcgacggcatgatgaaaggtacg
gtcgatatcgggctgatcgtgccgacgtccgatggcaggctgttccaccagcatctcgcg
gtggaggatctggtgatcgtgggcgccgcggcatcggacctacaggcggatcgcgcgatc
ccgttcagggacctcgcggacctgccactcatcctgcccgtgtcccagcccgggatccgc
aacagcctcgaaagcgccgcgctgcggctcgaaatgaagctgtcctccagattctcgacc
gactcgctccaggtgatgaaggacctcatcgaggcaggccacggctatggagtcctccct
ctttccgcgtgcggcgccgagatggccgcgcggaggctgcgctatgccccgctacgtgag
cccgcgctcagccaacagatcgggagcgccgccagcacacacctcgaactgccgcgcgga
ttcgccatcagggtcggcgcgatgattcgcgaggaagccgatcagctgatcgcgtccggc
gcctggaacgcccgcatgctgccgccgcgctccgtggacgagtag
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