Pseudofrankia inefficax: FraEuI1c_4870
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Entry
FraEuI1c_4870 CDS
T01354
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fri
Pseudofrankia inefficax
Pathway
fri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FraEuI1c_4870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fri02000
]
FraEuI1c_4870
Transporters [BR:
fri02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FraEuI1c_4870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADP82860
UniProt:
E3J1Q2
LinkDB
All DBs
Position
complement(5971804..5973543)
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AA seq
579 aa
AA seq
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MAAGLAALLALVGCAGSAGPAATALTTPAGVATVLPTDKPGGTLRVVTDAMPTGDPGWAV
TTADRAFARLVSRTLYSYPASADVDSAVVARPDLAVSAPQRSPNGLVITVRLSSAARWDT
PTPRRIVANDVARGLKRLCLPPNPSPLRGYFAATIVGFNAYCTELFTKPVEQLKDFIENQ
SPAGIQVVSNTDIAFHLIRPYTDFVDLLALPEAAPVPVEADDYQPNSPDYLNHLISDGPY
HVTSSADGVYSLGKDGQWNRAIDGIRQALPDHITITSGVAAADAQSQIEAGKADITLDSA
VPLDRATALFKAADPRLSVPTTGSDLFLTVGMHGPAGAALSDQDVRDALATCVDRIAVVE
ALGDPPFASAATQLLQPTMTGYSPLDPFPTQDGAGDATTCGDGLAKAPDGPVTELTLLTT
DTATDAAVAGALVETFAKVGVKLVVDAKARADFDTAAVSPLQQSWDLALTTVTPLWYGDA
GRTVFQPLFDPTWVGQRPVDGGYDAKEVLDTMSVALQAPTPASRAAAWGVLESTVLRDVA
VIPLAVLYEPRFHSSSVLSFNQVPSVGTVDPTDLALGPA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
gtggcggccggactggccgcgctgctcgctctcgtcggctgcgccggctcggccgggccg
gcggcgacggccttgaccacgcccgcgggcgtggccacggtcctgccgaccgacaaaccc
ggcggcaccctgcgggtcgtcaccgacgccatgcccaccggcgaccccggctgggccgtg
accacggccgaccgggcgttcgcccggctggtgagccgcacgctctacagctaccccgcg
tcggcggacgtcgacagcgccgtggtcgcccggcccgacctcgcggtctcggcgccgcag
cgcagccccaacggcctggtcatcacggtccggctgagctcggcggcgcgctgggacacg
ccgaccccgcgccggatcgtcgcgaacgacgtcgcccgcgggctcaagcggctgtgcctg
ccgccgaacccgtcgccgctgcgcggctacttcgccgcgacgatcgtcgggttcaacgcc
tactgcaccgagctgttcaccaagcccgtcgaacagctcaaggacttcatcgagaaccag
tcgccggccggcatccaggtcgtcagcaacaccgacatcgccttccacctgatccggccg
tacaccgacttcgtcgacctcctcgcgctgccggaggccgcgccggtgccggtcgaggcg
gacgactaccagccgaactcgcccgactacctcaaccacctgatctccgacggcccgtac
cacgtcaccagcagcgccgacggcgtctactcgctcgggaaggacgggcagtggaaccgg
gcgatcgacgggatccgccaggccctgccggaccacatcacgatcaccagtggcgtcgcc
gcggccgacgcgcagtcccagatcgaggccggcaaggcggacatcacgctggactcggct
gtcccgctggaccgcgcgacggcgctgttcaaggccgctgacccgcggctgagcgtgccg
acgacagggtccgacctcttcctcacggtcgggatgcacgggccggctggcgcggcgctg
agcgaccaggacgtccgggacgcgctcgcgacctgcgtcgaccggatcgccgtcgtcgag
gcgctgggtgacccgccgttcgcgagcgccgcgacccagctgctgcagccgacgatgacc
ggctactcgccgctggacccgttccccacccaggacggcgccggcgacgcgacgacctgc
ggtgacgggctcgcgaaggcccctgacgggccggtgaccgagctgacgctgctcaccacg
gacacggccaccgacgcggccgtcgcgggcgctctggtggagaccttcgccaaggtcggg
gtgaagctcgtcgtcgacgccaaggcgcgggcggacttcgacacggcggccgtcagcccg
ctgcagcagagctgggacctggcgctgaccaccgtgaccccgctctggtacggcgacgcc
ggcagaaccgtgttccagccgctgttcgacccgacctgggtcggccagcgtccggtcgac
ggcggctacgacgccaaggaagtcctcgacacgatgtcggtcgcgctgcaggcgccgacc
ccggcctcgcgcgccgccgcctggggggtgctggagagcaccgtgctgcgcgacgtcgcg
gtcatcccgctcgccgtcctctacgagccgaggttccacagctcgtcggtgctgtcgttc
aaccaggtcccgtccgtgggcacggtggacccgaccgacctcgccctcggcccggcctga
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