Pseudofrankia inefficax: FraEuI1c_4875
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Entry
FraEuI1c_4875 CDS
T01354
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fri
Pseudofrankia inefficax
Pathway
fri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FraEuI1c_4875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fri02000
]
FraEuI1c_4875
Transporters [BR:
fri02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FraEuI1c_4875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADP82865
UniProt:
E3J1Q7
LinkDB
All DBs
Position
complement(5977306..5979069)
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AA seq
587 aa
AA seq
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MRKRTIWIRSGVLAAAGALILAACGGSSGGGGSASNSSAAAGSLGLPTTTTQTFHTSDKK
GGTLRALSGSDCDFWDPQRTYYATCWDQQRWISRQLLTYVPKANSSELTGDLATSVPKSP
DGGQTWTYTLKSGIKFEDGTPITSKDIKYGIERTFATDVINGGPTYVIDELDDKANPYPG
PYKDTDPNKLGLKSIETPDDSTIIFHLNKKFPDWNFIMASPTATPVPQAKDTGDKYTSHP
VASGPYKIAEYTPNKSMKLVRNDQWDPSTDTVNKALPDEIDITMGLEATDIDNRILAGDA
DVFLDQTGVQSATQAKVHSDSSIFKTVDLSGFLRYLSITTDVKPFDNVHCRNAVAWAVNK
QAQSLARGGPDAGQPATTMLPPTLQYYKSFDLFPTPNNAGDIAKAKEELKACGKPNGFST
ILTSRTRPAEVAQAVALQSDLKKIGVTVTIDKFDASQYFSSVLGIPKNVQAKGYGLALTG
WGADWPAPYGFFSSIVDGRKILPQGNSNYASLNSATVNGGIDKALGSDDPAVDQAAWTQV
DKGVVESAAYVPLLYDKAVNIYSNKVTNVFFTPGFNMINFAALGVVR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaacgaacgatctggatcagatccggcgtgctcgcggccgccggcgccttgatc
ctggcggcctgtgggggcagcagcggtgggggaggctcggcgtccaacagcagcgccgcc
gccggttcgctcggcctgccgaccacgacgacgcagacgttccacacgtcggataagaag
ggcggcacgctgcgagccctctccggcagcgactgcgacttctgggacccgcagcggacc
tactacgccacgtgctgggaccagcagcgttggatctcccgtcagctgctgacctacgtg
ccgaaggccaactcgtccgagctgaccggtgacctggcgacgtccgtcccgaagtcgccc
gacggcggccagacgtggacctacacgctgaagtccgggatcaagttcgaggacgggacc
ccgatcacgtccaaggacatcaagtacggcatcgagcgcaccttcgcgactgacgtgatc
aacggcggtccgacctacgtcatcgacgagctcgacgacaaggcgaacccgtacccgggc
ccgtacaaggacaccgacccgaacaagctcgggctgaagtcgatcgagacgccggacgac
tcgacgatcatcttccacctgaacaagaagttcccggactggaacttcatcatggcctcc
ccgacggccaccccggtgccgcaggcgaaggacaccggtgacaagtacacctcgcacccg
gtcgcgtccggcccgtacaagattgccgagtacacgccgaacaagtccatgaagctggtc
cgcaatgaccagtgggacccgtcgaccgacacggtcaacaaggccctgccggacgagatc
gacatcaccatgggcctcgaggcgaccgacatcgacaaccggatcctcgccggcgacgcg
gacgtcttcctggaccagaccggcgttcagtcggcgacccaggcgaaggtccactcggac
tcgtccatcttcaagacggtcgacctgtccggcttcctgcgctacctgagcatcaccacc
gacgtgaagccgttcgacaacgtccactgccgcaacgcggtcgcctgggccgtcaacaag
caggcccagtcgctcgctcgtggtggcccggacgctggccagccggcgaccacgatgctg
ccgccgacgctgcagtactacaagtcgttcgacctgttcccgacgccgaacaacgccggt
gacatcgccaaggccaaggaagagctgaaggcctgtggcaagccgaacggcttctcgacg
attctgacgtcccgcacccggcccgccgaggtcgcgcaggcggtggcgctccagtccgac
ctgaagaagatcggcgtcaccgtcaccatcgacaagttcgacgcctcgcagtacttctcc
tccgtgctcggtatcccgaagaacgtgcaggccaagggctacggcctggcgctgaccggt
tggggtgctgactggccggctccgtacggcttcttcagctcgatcgtcgacggccggaag
atcctgccccagggcaacagcaactacgcctcgctgaacagcgcgaccgtcaacggcggc
atcgacaaggccctcggctcggacgacccggctgtcgaccaggccgcctggacccaggtc
gacaagggtgtcgtcgagtccgcggcctacgttccgctgctctacgacaaggccgtgaac
atctacagcaacaaggtgacgaacgtcttcttcacccccggcttcaacatgatcaacttc
gccgctctcggcgtggttcgttga
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