Pseudofrankia inefficax: FraEuI1c_5202
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Entry
FraEuI1c_5202 CDS
T01354
Name
(GenBank) transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
fri
Pseudofrankia inefficax
Pathway
fri02020
Two-component system
fri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FraEuI1c_5202
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FraEuI1c_5202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fri03000
]
FraEuI1c_5202
Transcription factors [BR:
fri03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
FraEuI1c_5202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
HTH_24
GntR
DUF4938
HTH_IclR
MarR_2
HTH_5
HTH_20
LexA_DNA_bind
MarR
Motif
Other DBs
NCBI-ProteinID:
ADP83190
UniProt:
E3J6X0
LinkDB
All DBs
Position
complement(6399849..6400577)
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AA seq
242 aa
AA seq
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MGEQDAHAQWSAGSARRWPEQTLLGRLPADSQAGMLALGGFREFTSGIPIMREGDPTTFV
AVLLRGWTKVTALTEDGGVALLAVRHGGDVVGEFAGIDSQPRSATVTAVGKVLAKVIRAE
EFAAYLATDPSAAAAISHSIVAKTRFSIRRRVEFAGCSVAVRVARVLVELDRAYGVDDGG
GLRALGMPLTQGELAALVGAKDPTVHKALRALRQDGVIEWGYRRIKIRDLPALRIAAGLP
PG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
gtgggggagcaggacgcacacgcgcagtggtcggccgggtccgcccggcgctggcccgag
cagacgctgctcggccggctgccggcggactcgcaggcgggcatgctcgccctcggcggg
ttccgggagttcacctccggaataccgatcatgcgggagggtgacccgacgacgttcgtc
gcggtgctgctgcgcggctggacgaaggtgacggcgctgaccgaggacgggggcgttgcg
ctgctcgccgtccggcacgggggtgacgtcgtcggcgagttcgcgggcatcgactcccag
ccgcgctccgcgaccgtcaccgccgtcggcaaggtgctggccaaggtgatcagggcggag
gagttcgccgcctatctggccaccgacccgagcgcggcggcggcgatcagccacagcatc
gtcgcgaagacccggttcagcatccgccggcgggtcgagttcgccggctgttcggtggcc
gtccgggtggcccgggtgctcgtcgagctggaccgcgcctacggcgtcgacgacggcggc
gggctacgggcgctgggcatgccgctgacccagggggagctcgccgccctcgtcggcgcc
aaggacccgacggtgcacaaggcgctgcgcgcgctgcgccaggacggggtcatcgagtgg
ggctaccggcgcatcaagatccgggacctgccggccctgcggatcgcggccggcctgccc
cccgggtaa
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