Pseudofrankia inefficax: FraEuI1c_5359
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Entry
FraEuI1c_5359 CDS
T01354
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
fri
Pseudofrankia inefficax
Pathway
fri02010
ABC transporters
fri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FraEuI1c_5359
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FraEuI1c_5359
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fri02000
]
FraEuI1c_5359
Transporters [BR:
fri02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
FraEuI1c_5359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
ADP83347
UniProt:
E3J9I3
LinkDB
All DBs
Position
6583885..6585132
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AA seq
415 aa
AA seq
DB search
MIRKPRTVLAAAAAVATVLLAAGCGSSGSGGSTAGATGAATNKTITVGVIADMTGAAASG
NKSVVEGVKAGTYYASRNGYTIKYIVGDTATNPATALAVAQKFVTQDHVFAVLANSSLLF
AAAPYLTAHNVPVIGAAEDGPEWITSKNMYSIFGALQTTKVATTMGKFFKMEGVTSLGVA
AYSLPIASESGAAAAASAEAAGIKVGYLNAKVTLGSDVAPIVLAMKNAKVDGIVMQMDPD
TAFGIIKGLRDQGVNLKAALLPTGYGGDLLQAGPGALAAAQNVYFLSGYELMEMGTPATK
SFAADLKSAGVNGTPAYGMYNGYVSVGLLVQGLKAAGANPTSASLLTALSGIHDFTALGL
YGSHKLDINDRENIVAGADNCQWIAKLEGSTFKPVPNAIPVCGDIVPGKTVSAAT
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgtaagcccaggactgtcctcgccgccgcggcggccgtcgcgacggtgctctta
gcggcaggctgtggctcgtcgggctcgggcggttccaccgccggcgcgaccggtgcggcc
acgaacaagaccatcactgtcggcgtcatcgccgacatgaccggcgccgcggcctccggc
aacaagtctgttgtcgaaggcgtcaaggccgggacgtactacgcgtcccgcaacgggtac
acgatcaagtacatcgtcggtgacaccgccacgaacccggcgaccgcgcttgcggtcgcg
cagaagttcgtcacgcaggaccacgtcttcgcggtcctcgccaactcgtctcttttgttc
gcggccgcgccctacctgaccgcgcacaacgtgccggttatcggcgccgccgaggacggc
cccgagtggatcacgtcgaagaacatgtactcgatcttcggcgcgctccagaccaccaag
gtcgcgacgaccatgggcaagttcttcaagatggagggcgtcaccagcctcggcgtcgcc
gcctactcgctcccgatcgcctcggagtccggcgcggccgccgcggcctcggcggaggcc
gccgggatcaaggtcggctacctgaacgcgaaggtcaccctcggctccgacgtcgcgccg
atcgtgctcgcgatgaagaacgccaaggtcgacggaatcgtcatgcagatggacccggac
accgcgttcggaatcatcaagggcctgcgtgaccagggcgtgaacctgaaggccgcgctg
ctgcccaccggctacggcggcgacctgctccaggccggtccgggcgcgctcgccgcggcc
cagaacgtctacttcctctccggctacgagttgatggagatggggacgccggcgaccaag
tcgttcgcggccgacctgaagagcgcgggcgtcaacggcacccccgcctacggcatgtac
aacgggtacgtctcggtcggcctgctcgtccaggggctcaaggccgccggcgcgaacccg
acgtcggcctcgctgctgacggccctgtccggtatccacgacttcactgcccttggtctc
tacggcagccacaagctggacatcaacgaccgcgagaacatcgtggccggtgcggacaac
tgccagtggatcgcgaagctggagggcagcaccttcaagccggtgccgaacgccatcccg
gtctgcggcgacatcgtcccgggcaagacggtctccgcggctacctga
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