Pseudofrankia inefficax: FraEuI1c_5595
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Entry
FraEuI1c_5595 CDS
T01354
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
fri
Pseudofrankia inefficax
Pathway
fri02010
ABC transporters
fri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FraEuI1c_5595
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FraEuI1c_5595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fri02000
]
FraEuI1c_5595
Transporters [BR:
fri02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
FraEuI1c_5595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
Fe-ADH
Rv1476
Motif
Other DBs
NCBI-ProteinID:
ADP83580
UniProt:
E3JDE7
LinkDB
All DBs
Position
complement(6858729..6860009)
Genome browser
AA seq
426 aa
AA seq
DB search
MARQLGNRHSRALAAVAAVIVTSLVAAGCATTGGSSSSTSGAACNTPGYSANEIQLGFIY
PNSGAVAPALSASKSGFDARIAEANAAGGIYGRKIVTSWRDDAGTPGQNLEAAQDLIERQ
KVFGLVEATVAAGGSAEYLRKANVPVSGIAAEALWADPKYRNMFEYSYVFTTGPSVTTFG
DYAKSQGGTKAAIIESDGTANATDIGAKIGTSLAAAGIPTAPGHFLYSPNAVDPEKLGEQ
LKAAHVDVVVAAFAGDQLAELVRGIKAGGASLKVILAPSGYDSSLVRKYGKTLSGLTAAV
AYVPFQIGDKAHQDYLRAMSNFAPELQPPDQELAFVTYILTDLFLYGLQKAGPCPTRAGY
IDALRASTYTSGLLPGPVDMTKDFGQIARCYTFMRVNDAGTGYDVVPSAEAGATDRNQWC
GQRLTQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
ttggctcgccagctcggcaatcggcactctcgggcgctcgcggcggtggctgctgtgatc
gtcacctcgctggtggcggccggctgcgcgacgaccggcggcagctcgtccagcacctcg
ggggccgcctgcaacacgcctggctacagcgccaacgagatccagctgggcttcatctac
cccaactccggcgcggtcgcaccggcgctgagcgcttccaagagcggcttcgacgcgcgg
atcgccgaggcgaacgcggccggcggcatctacgggcgcaagatcgtgacgtcttggcgc
gacgacgccgggacgccgggacagaatctcgaagccgctcaggacctgatcgagcggcag
aaggtcttcggcctcgtcgaggcgacggtggccgcgggcggcagcgccgagtacctgcgc
aaggccaacgtcccggtgtcgggaatcgcggccgaggccctctgggccgatcccaagtac
cgcaacatgttcgagtactcgtacgtgttcaccaccggcccgtcggtgacgaccttcggc
gactacgcgaagtcgcagggcggcaccaaggcggccatcatcgaaagcgatggcaccgcg
aacgcgaccgacatcggcgcgaagatcggcaccagcctggcggcggcgggcatcccgacc
gcgcccggccactttctctacagcccgaacgccgttgacccggagaagctgggcgagcag
ctgaaggccgcccatgtcgacgtcgtggtcgccgcgttcgccggtgaccagctggccgag
ctggtccgcggcatcaaggcgggcggcgcgtcgttgaaggtcattctcgcgccgagcggc
tacgacagctcgctggtgcgcaagtacggcaagacgctcagcggcctgaccgcggccgtc
gcctacgtcccgttccagatcggcgacaaggcccaccaggactacctgcgcgcgatgagc
aacttcgcccccgagctccagccgccggaccaggagctcgccttcgtcacctacatcctc
accgatctcttcctgtacggcctgcagaaggcgggaccgtgcccgacccgggccgggtac
atcgacgcgctgcgggccagtacgtacacgtccggcctgctcccggggccggtcgacatg
acgaaggacttcggccagatcgcccgctgctacaccttcatgcgggtgaacgacgcgggc
accggctacgacgtcgtccccagcgccgaggcaggtgccaccgaccgcaaccagtggtgc
ggccagcggctcacccagtag
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