Pseudofrankia inefficax: FraEuI1c_6129
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Entry
FraEuI1c_6129 CDS
T01354
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FraEuI1c_6129
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fri01007
]
FraEuI1c_6129
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fri03016
]
FraEuI1c_6129
03029 Mitochondrial biogenesis [BR:
fri03029
]
FraEuI1c_6129
Enzymes [BR:
fri01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
FraEuI1c_6129
Amino acid related enzymes [BR:
fri01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FraEuI1c_6129
Transfer RNA biogenesis [BR:
fri03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FraEuI1c_6129
Prokaryotic type
Other AARSs
FraEuI1c_6129
Mitochondrial biogenesis [BR:
fri03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FraEuI1c_6129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADP84113
UniProt:
E3J208
LinkDB
All DBs
Position
complement(7555747..7557540)
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AA seq
597 aa
AA seq
DB search
MVTADGHSAPAAVQVRQTAMRSHRCGDPRLADAGETVTVCGWVAHRRQHGQSLQFIDLRD
YSGVIQCVVDGTVDVRSEYVLKITGLVTERPEGTVNEALATGQVELRDCKVEVLSVAKPP
PFPLDDRADNVDESTRLTFRYLDLRRERMQRNLRIRSTVLAAIRTALSPLGFVEVETPLL
MPSTPEGAREFIVPSRQFPGSFYALPQSPQLFKQLLMVGGADRYFQFARCLRDEDLRADR
QYEFTQLDLEMSFVDQQDVLDVITSAVLAATEAITGGPVPPVETMTWQHAMDRYGVDKPD
LRFGMELVELTEVFAGSGFKAFAGVGAVKGIRVPGGSASHNRKALDTLTDTAKKLGAKGL
VWMRVGAAGALESPVAKFLSEAELAGIVEKTEAREGDLLLLVADEWTTACEVLGQLRNSL
GRPPAGEGGFRFVWVVDFPQFVGIDKETGRPKPGHHPFTRPHPDDLDKLETEPLQVRSRA
YDLVLNGWELGSGSIRIHEPELQQRIFDLIGISREEADRRFGFFLTPFGYGAPPHGGFAF
GIDRLVASLAGEENIREVIAFPKTQSGLDPLTGAPTRVDERQLKELGVRVVAAVPPA
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggtgacggcagacgggcacagcgcgccggcggcggttcaggtgcggcagaccgcgatg
cggtcgcaccggtgtggcgatccgcggctcgccgacgccggggagaccgtgacggtgtgc
ggctgggtggcgcaccggcgccagcacggccagtcgctgcagttcatcgacctgcgggac
tactccggcgtcatccagtgcgtggtcgacgggacggtcgacgtccgctcggagtacgtc
ctgaagatcaccggcctggtgaccgagcggccggaaggcaccgtcaacgaggctctcgcg
accggtcaggtcgagctgcgggactgcaaggtcgaggtgctgtcggtcgccaagccgccg
cccttcccgcttgacgaccgcgcggacaacgtggacgagtcgactcggctgaccttccgt
tacctggacctgcggcgcgagcggatgcagcgcaacctgcggatccgttccacggtgctc
gccgccatccgcaccgcgctgagcccgctcgggttcgtcgaggtcgagacgccgctgctg
atgccgtcgacgccggagggtgcgcgggagttcatcgtgccgtcccggcagttccccggc
agcttctacgcgctgccgcagtcgccgcagttgttcaagcagctgctgatggtcggcggc
gcggaccggtatttccagttcgcccgctgcctgcgggacgaggacctgcgtgccgaccgg
cagtacgagttcacccagctcgacctggagatgagcttcgtcgaccagcaggacgtactg
gatgtgatcacctccgccgtgctggccgcgaccgaggcgatcaccggcggcccggtgccc
ccggtcgagacgatgacctggcagcacgcgatggaccggtacggcgtcgacaagccggac
ctgcggttcggcatggagctggtcgagctgaccgaggtcttcgccggcagcggcttcaag
gccttcgccggtgtcggggccgtcaagggcatccgggtgcccggtggctcggcgtcgcac
aaccgcaaggcactggacacgctgaccgacacggccaagaagctcggcgcgaagggcctg
gtctggatgcgggtcggggccgcgggcgcccttgagtcgccggtggccaagttcctctcc
gaggccgagctggccggcatcgtcgagaagaccgaggcgcgggagggtgacctgctgctg
ctggtcgccgacgagtggacgaccgcctgcgaggtgctcggccagctgcgcaactcgctg
ggtcgcccgccggcgggcgagggcggcttccgcttcgtctgggtggtcgacttcccgcag
ttcgtcggcatcgacaaggagacgggccgcccgaagccgggccatcacccgttcacccgg
ccgcacccggacgacctggacaagctggagaccgagccgctgcaggtccgtagccgggcc
tatgacctggtgctcaacggctgggagctcggctccggctcgatccggattcacgagccg
gagctgcagcagcggatcttcgacctgatcgggatcagccgggaggaggcggaccgccgg
ttcggcttcttcctcaccccgttcggctacggcgccccgccgcacggtggcttcgcgttc
gggatcgaccggctggtggcgagcctggccggcgaggagaacatccgcgaggtcatcgcg
ttcccgaagacccagtcgggcctggacccgctgaccggcgcgccgacccgcgtcgacgag
cggcagctcaaggagcttggcgtccgcgtcgtcgcagcggtgcctccggcctga
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