Pseudofrankia inefficax: FraEuI1c_6161
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Entry
FraEuI1c_6161 CDS
T01354
Name
(GenBank) succinyl-CoA synthetase, beta subunit
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri00020
Citrate cycle (TCA cycle)
fri00640
Propanoate metabolism
fri00660
C5-Branched dibasic acid metabolism
fri00720
Other carbon fixation pathways
fri01100
Metabolic pathways
fri01110
Biosynthesis of secondary metabolites
fri01120
Microbial metabolism in diverse environments
fri01200
Carbon metabolism
Module
fri_M00009
Citrate cycle (TCA cycle, Krebs cycle)
fri_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FraEuI1c_6161
00640 Propanoate metabolism
FraEuI1c_6161
00660 C5-Branched dibasic acid metabolism
FraEuI1c_6161
09102 Energy metabolism
00720 Other carbon fixation pathways
FraEuI1c_6161
Enzymes [BR:
fri01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
FraEuI1c_6161
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
CPSase_L_D2
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
ADP84145
UniProt:
E3J240
LinkDB
All DBs
Position
complement(7595511..7596677)
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AA seq
388 aa
AA seq
DB search
MDLFEYQAKALFAEHGVPVPTGKTAATPEEARAIAAELGGKVVVKAQVKAGGRGKAGGVK
VADGPDDAFEKASAILGMDIKGHTVHSVLVEQASNIAEEYYASFLLDRANRTFLAMASRE
GGMEIEEVAATKPEALARIHIDPLAGVDLAKAREIAVAAKLPEAALDGAAELLTKLWEVF
VQADATLVEVNPLILTGEGTVVALDGKVSLDENADFRHPENEALVDNSAVDPLEQKAKEK
GLNYVKLTGEVGIIGNGAGLVMSTLDVVTYAGEEFGGKRPANFLDIGGGASAEVMANGLS
IILSDPSVKSVFVNIFGGITACDAVANGIIKALELVGDITTPLVVRLDGNNAEEGRRILA
EANLPVVKPVDTMDGAAKLAAELAAAAA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
gtggatctcttcgaataccaggcgaaggccctcttcgccgaacatggcgtcccggtgccc
accggcaagaccgccgccaccccggaagaagcccgcgcgatcgccgcggagctaggcggc
aaggtcgtcgtcaaggcccaggtgaaggccggtggccgcggcaaggccggcggcgtgaag
gtcgccgacgggccggacgacgccttcgagaaggccagcgccatcctcgggatggacatc
aagggccacaccgtgcactcggtgctcgtcgagcaggccagcaacatcgcggaggagtac
tacgcgtcgttcctgctggaccgcgcgaaccgtaccttcctggcgatggcgtcccgcgaa
ggtggcatggagatcgaggaggtcgccgccaccaagcccgaggcgctcgcccgtatccac
atcgacccactggccggcgtcgacctggcgaaggcccgtgagatcgccgtcgccgccaag
ctccccgaggccgccctcgacggcgccgccgagctgctcaccaagctctgggaggtgttc
gtccaggcggacgccaccctggtcgaggtcaacccgctgatcctgaccggcgagggcacg
gtcgtcgccctcgacggcaaggtctcgctggacgagaacgccgacttccggcacccggag
aacgaggcgctcgtcgacaactccgcggtcgacccgctggagcagaaggcgaaggaaaag
ggcctcaactacgtcaagctgaccggtgaggtcggcatcatcggcaacggcgccggcctg
gtcatgtcgaccctggacgtcgtcacctacgccggtgaggagttcggcgggaagcgcccg
gcgaacttcctcgacatcggcggcggcgcctcggccgaagtcatggcgaacggcctttcg
atcattctttccgacccgtcggtgaagagcgtcttcgtcaacatcttcggcggtatcacc
gcctgtgacgcggtcgccaacggcatcatcaaggcgctcgagctggtgggcgacatcacc
accccgctggtcgttcgcctggacggcaacaacgccgaggaaggccgacgcatcctcgcc
gaggccaatctcccggttgtgaagccggtcgacaccatggatggcgcggccaagctcgcc
gccgagctcgccgccgccgcggcctga
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