Pseudofrankia inefficax: FraEuI1c_6166
Help
Entry
FraEuI1c_6166 CDS
T01354
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FraEuI1c_6166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fri03019
]
FraEuI1c_6166
03110 Chaperones and folding catalysts [BR:
fri03110
]
FraEuI1c_6166
03029 Mitochondrial biogenesis [BR:
fri03029
]
FraEuI1c_6166
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fri04147
]
FraEuI1c_6166
Enzymes [BR:
fri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FraEuI1c_6166
Messenger RNA biogenesis [BR:
fri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FraEuI1c_6166
Chaperones and folding catalysts [BR:
fri03110
]
Heat shock proteins
HSP60 / Chaperonin
FraEuI1c_6166
Mitochondrial biogenesis [BR:
fri03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FraEuI1c_6166
Exosome [BR:
fri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FraEuI1c_6166
Exosomal proteins of other body fluids (saliva and urine)
FraEuI1c_6166
Exosomal proteins of breast cancer cells
FraEuI1c_6166
Exosomal proteins of colorectal cancer cells
FraEuI1c_6166
Exosomal proteins of bladder cancer cells
FraEuI1c_6166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
Motif
Other DBs
NCBI-ProteinID:
ADP84150
UniProt:
E3J245
LinkDB
All DBs
Position
7602709..7604352
Genome browser
AA seq
547 aa
AA seq
DB search
MSKILTFREDARHALEHGVNTLADAVKVTIGPRGRNVVLDKSYGAPTITNDGVTIAREVE
LTNPHENLGAQLVKEVATKTNDVAGDGTTTATVLAQAMVRQGLKEVTAGAAPVSLKYGIE
AAVEAVSQALLDAAIEVSSRETIAQVAAISAQDTQVGELIAEAIDKIGKDGVITIEESQT
MGLELELTEGMQFDKGYISPYFVTDQERMEAVLEDAFVLLHPGKIGALNDLLPVLELVVQ
ERKPLLIVAEDIDGEALSTLVVNAMRKTFQVVAVKAPGFGDRRKAMLQDLAVLTGGQVIA
EEVGLKLDAATLADLGRIRRVVVDKDTTTLVDGAGDPESVSARVKQIRAEIEASDSDWDK
EKLQERLAKLAGGVAVIRVGAATEVELKEKKHRLEDAVSATKAAIDEGVVAGGGSALVHV
ASALDGDLGKTGDERSGVRLVRSALTAPLYWIARNAGLDGPVVVSKVSEQPVNHGFNAAT
LTYGDLIADGVIDPVKVTRSAVANAASITALLLTTEALVVEKPAEAAPAAAGHGHSHGHG
HSHGPGF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagatcctcacatttcgcgaggacgcgcgccacgcgctcgagcacggggtgaac
acgctggccgacgcggtcaaggtgaccatcggcccgcgcgggcgcaacgtcgtcctcgac
aagtcctacggcgctcccaccatcacgaacgacggcgtgaccatcgcccgtgaggtcgag
ctgaccaacccgcacgagaaccttggcgcccagctcgtcaaggaggtcgcgaccaagacc
aacgacgtcgccggcgacggtacgacgacggcgacggtcctggcgcaggccatggttcgc
cagggcctcaaggaggtcaccgccggcgctgccccggtgtcgctgaagtacggcatcgag
gcggccgtcgaggcggtctcccaggcgctgctcgacgcggccatcgaggtcagctcgcgg
gagacgatcgcccaggtcgccgcgatctccgcccaggacacccaggtcggcgagctcatc
gccgaggcgatcgacaagatcggcaaggatggtgtcatcaccatcgaggagagccagacc
atgggtctggagctcgagctgaccgaggggatgcagttcgacaagggctacatctccccg
tacttcgtcaccgaccaggagcggatggaggccgtcctcgaggacgccttcgtgctgctg
caccccggcaagatcggcgctctcaacgacctgctgccggtgctcgagctggtggtgcag
gagcgcaagccgctgctgatcgtcgccgaggacatcgacggcgaggccctgtcgaccctg
gtcgtcaacgcgatgcgcaagaccttccaggtcgtcgcggtcaaggcgcccggcttcggt
gaccgccgcaaggcgatgctgcaggacctcgccgtgctcaccggcggccaggtcatcgcc
gaggaggtcggcctcaagctcgacgcggccaccctcgccgacctcggccggattcgccgg
gtcgtcgtcgacaaggacaccaccacgctggtcgacggcgcaggcgaccccgagtcggtc
tccgcgcgggtcaagcagatccgggccgagatcgaggcctccgactccgactgggacaag
gagaagctgcaggagcggctggcgaagctcgccggcggcgtcgcggtcatccgggtcggc
gcggccaccgaggtcgagctcaaggagaagaagcaccgtctggaggacgcggtctccgcc
accaaggcggcgatcgacgagggtgtggtcgccggcggcggctccgcgctcgtgcacgtc
gccagcgcgctggacggcgacctgggcaagaccggtgacgagcggtccggggttcggctg
gtgcggtccgcactgaccgcgccgctgtactggatcgcccgcaacgccggcctcgacggc
ccggtcgtcgtgtcgaaggtctccgagcagccggtcaaccacggcttcaacgcggccacc
ctgacctatggcgacctgatcgccgacggggtcatcgacccggtcaaggtcacccggtcg
gccgtcgcgaacgccgcgtcgatcacggcgctgctgctgaccaccgaggccctcgtcgtg
gagaagccggccgaggcggcccccgccgcggctggtcacggccacagccacgggcacggc
cacagccacgggcctggcttctag
DBGET
integrated database retrieval system
