KEGG   Pseudofrankia inefficax: FraEuI1c_6635
Entry
FraEuI1c_6635     CDS       T01354                                 
Name
(GenBank) NB-ARC domain protein
Organism
fri  Pseudofrankia inefficax
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 EIF3I WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st NB-ARC DUF4062 Beta-prop_Vps41 Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_IFT140_1st APAF1_C Beta-prop_HPS5 Beta-prop_DCAF4 VID27 Dark_WHD
Other DBs
NCBI-ProteinID: ADP84605
UniProt: E3JAY4
LinkDB
Position
8110506..8114648
AA seq 1380 aa
MDLIGGDQGATGGSGPNPPWRIFISHTSELARHPARLPFVVAAKRAITDSGHVAVDMSGF
EPEDSDPAEMCRRRVGDCSIYLGIIGFRYGSPVRGHEAVSYTELEFDTATALGLERLVFL
LDEKRTVGTHEWLADVSYGERQLAFRTRIMDDLVATSVASPEELEAKIIRALVGLQERRA
RAERRAAAAVLVHPPALPLRSRRPLEHVVERPELTGRLITALTSDGSAPVAVRGGGGFGK
STLATVIADRPEILARFPDGHIWMDIGPDLAGPRLAAKINECATWLGAVGPGPADPHLAG
VRLGDLLGERRLLIIIDDVWRAEQLQPFREGGRNCRRLVTTRDRAVLPMDAVLVDVDVMA
PGQAVRLLTEAVPGLDDDRAGPLAQRCGYWPVLLRLVAGHLHGMLLDGRPLDGALTEVTD
GLDEEGLAAFDDSTRRERAVAATVEASLRLLGEMDAFGDGALERFQDLAAFPRGATIPRD
LLDVLWRHTAGWGRLQTSRFCLRLTDLSLVLAVPGEDGGLRLHDVMHEYLQMQLGPRLPE
VHVRLLAARARDLPVEDGQPAWSQLPEQERYLWEHLAVHLAEAGERARLVALVQDLRWVA
AKIRLVGPASVEADMALLGAHPVALALARLVRQTANLRDTGDAPQAVVATLAAYAAGIEV
LAPAARRALRRLPGQALRPMVPPLPDQPDPALLRTLTGPIGHITGLAVADDESWLAAGGG
ADAGDGEGTVVIWHLPTGGERVLRAGHSGPVSALAASRDGSWLASADRDGTVRIWDVETS
RLRHTLTGHSGRVAILVAAPDGSWLASGGAGDGTVRIWNTADGTLRHVLPSAGAWISAMA
VGPDGHWLAVGAGDGSLRVWDPATGACSASTQAHAGWVSELAVEPGGSWLASGGGDGTVR
LWAPAALLAEGSSPPAPPARPSGAGGPAGPATLVAAPDGSWLASGGGDGRVRLWDPVHGV
ERRVLSGHAGDVTALVVAPDGSWLASAAGDGTIQVADPRAVSDRVLVPGHARPAHALVAA
PNGSWLASAGGDGTVRMWDPAAVGAERAEPVGRIRGVTAIESAGSDGWLAVGSGDGVIRL
WDAQAGAERAALTGHPASVRALAAPSDGRWLASLDDDNVARVWDPREGAHTRLASAGLTT
RVSALLADPRGSWLASGGPDAVVRLWDPVSGAERAVLPGHGQGVLALAAPADGSWLASAG
GDATVRVWDPAEGQGASPLHVFDGHTSRVQWLAAAPNGSWLASAGIDGTIRIWDVGTGTR
RLVLGGDLHDVWALAAAPDGSWLASGGADACVRIWDPVGGVERHVLTGHREGVVALAVSP
DGAWIASVSSRDRTARIWTPGGTAATMIRLDGALQCCRWTGPTRLAVGGARGLYLFDLAG
NT seq 4143 nt   +upstreamnt  +downstreamnt
atggatctcatcggcggagatcagggtgctacgggtggctccggaccgaacccgccgtgg
cggatcttcatcagccacaccagcgagcttgcccggcaccctgcgcgcctgccgttcgtc
gtggccgcgaaaagagccattacggactccggtcatgtcgcggtcgacatgtccggtttc
gagcccgaggacagcgatcccgccgagatgtgtcggcgccgggtcggcgactgctcgatc
tacctcggaatcattggattccggtacggctcccccgtgcgcggccacgaggccgtctcc
tacacggagctggagttcgacacggcgaccgcgctcgggctggaacgcctggtgttcctc
ctcgacgagaaacgcaccgtgggaacgcacgagtggctcgccgacgtcagctacggcgaa
cgccagctggccttccgcacccggatcatggatgacctggtcgcgacgtcggtcgcgtcg
cccgaggaactcgaagcaaagatcattcgcgcgctcgtgggcctacaggagcgccgggcg
cgggcggaacgccgggcggcggccgccgtcctcgtccacccgcccgcgctgccgttgcgg
tcacggcggcccctcgagcacgtcgtggagcggcccgagctgacggggaggctgatcacg
gcgctcacctcggacggctccgcgccggtcgccgtccggggcggtggcgggttcggcaag
tcgacgctggccaccgtcatcgccgaccggcccgagatcctggcccggtttcccgacggg
cacatctggatggacatcggccccgacctggccggcccccggctcgccgcgaagatcaac
gaatgcgcgacctggctcggggcggtcgggcccgggccggcggacccgcacctggccggc
gtgcggctgggcgacctgctcggcgagcgccggctgctgatcatcatcgacgacgtgtgg
cgggcggagcagctccagccgttccgggagggcgggcgcaactgccgccggctggtcacc
acccgcgaccgggccgtcctgccgatggacgccgtgctggtcgacgtcgacgtcatggca
cccggccaggcggtacgcctgctcaccgaggcggttcccgggctggacgacgaccgggcc
gggccgctcgcccagcgctgcggctactggccggtgctgctgcggctggtcgccggccac
ctgcacggcatgctgctcgacggccgcccgctggacggggcgctcacggaggtcaccgac
ggtctggacgaggagggcctggcggcgttcgacgacagcacccgccgcgagcgggccgtc
gcggcgaccgtcgaggcgagcctgcggctgctcggcgagatggacgccttcggtgacggg
gcgctcgaacgcttccaggacctggccgcgttcccgcggggcgcgacgatcccgcgggac
ctgctggacgtgctctggcggcacaccgccgggtggggccggctgcagaccagccggttc
tgcctgcggctgaccgacctgtccctggtcctcgccgtgcctggggaggatggcgggctg
cggctgcacgacgtcatgcacgagtacctccagatgcagctcggcccgcggctgcccgag
gtccacgtccggctgctcgccgcgcgggcccgtgacctgcccgtcgaggacgggcagccg
gcctggtcccagctgccggaacaggagcggtacctgtgggagcacctggccgtgcacctg
gccgaggccggcgagcgcgccaggctcgtcgcgctggtgcaggacctgcgctgggtggcg
gccaagatccgcctggtcgggcccgccagcgtggaggcggacatggcgctgctcggggcg
catccggtcgcgctcgcgctggcccggctcgtgcggcagacggcgaacctgcgggacacc
ggcgatgcgccgcaggccgtcgtcgcgacgctcgccgcctacgccgccggcatcgaggtg
ctcgcgccggccgcgcgccgcgcgctgcgtcggctgccgggccaggcgctgcggccgatg
gtgccgccgctgcccgaccagcccgacccggcgctgctgcggaccctgaccgggccgatc
ggccacatcaccggactggcggtggccgacgacgagtcctggctcgccgccggcggtggc
gcggacgcgggcgacggcgagggcaccgtggtgatctggcacctgcccaccgggggtgaa
cgggtcctgcgcgccggccacagcggtcccgtctcggcgctcgcggcctcccgggacggg
tcctggctggcgtcggccgaccgggacgggaccgtgcggatctgggacgtcgagaccagc
cggctgcggcacacgctgaccggtcacagcggccgggtcgcgatcctggtggcggcgccg
gacgggtcctggctcgcctcgggcggggcgggcgacgggacggtccggatctggaacacg
gcggacggcacgctgcgccacgtgctgccgagcgccggcgcctggatctccgcgatggcc
gtcggcccggacgggcactggctcgccgtcggtgccggcgacgggtcgctgcgggtctgg
gatccggcgaccggcgcctgctcggcgtcgacgcaggcacacgccggctgggtgtcggag
ctggcggtcgagccgggcgggtcctggctggcgtccggcggcggtgacggcaccgtgcgg
ctatgggctcccgccgcgctgctcgccgagggctccagcccgccggccccgcccgcgcgg
cccagtggcgccggcggtcccgccggcccggcgaccctggtcgcggccccggacggctcg
tggctggcctccggcggcggtgacggccgtgtgcggctctgggatccggtccacggcgtc
gagcgccgggtcctgagcgggcacgccggcgacgtcaccgcgctcgtcgtcgcgcccgac
ggctcgtggctggcctcggccgccggggacgggacgatccaggtcgccgacccgcgggcg
gtcagcgaccgtgtgctggtgcccggccacgcccgtccggcgcacgcgctggtggcggca
ccgaacgggtcgtggctcgcgtccgccgggggcgacgggacggtgcgcatgtgggacccg
gccgcggtcggggccgaacgggccgagccggtcggccggatccgcggggtgaccgcgatc
gagtcagccgggtccgacggctggctggccgtcggctccggcgacggggtgatccggctg
tgggacgcccaggcgggagccgaacgcgccgcgctcaccgggcacccggcctcggtccga
gccctcgccgccccgtccgacgggcggtggctcgcctcgctggacgacgacaacgtggcg
cgggtctgggatccgcgcgagggcgcgcacaccaggctcgcctcggccggtctcaccacg
cgggtctcggcgttgctggccgacccgcgcggatcgtggctggcctccggtgggccggac
gccgtcgtccggctgtgggacccggtctccggcgcggaacgcgcggtgcttcccgggcat
ggccagggcgtcctggcgctggccgcgccggccgacgggtcctggctcgcttcggcgggc
ggcgacgcgaccgtccgcgtctgggacccggccgaagggcagggcgcgtcaccgctgcat
gtcttcgacggtcacaccagccgcgtgcagtggctggcggcggcaccgaacgggtcctgg
ctcgcctcggccggcatcgacgggaccatccggatctgggacgtcggcacgggaacgcgc
cgcctggtcctcggcggcgacctgcacgacgtctgggccttggccgcggcgccggacggg
tcctggctcgcctcgggcggggcggacgcctgcgtccggatctgggatccggtcggcggg
gtcgaacggcacgtgctgaccggtcaccgcgagggcgtcgtggcgctcgcggtctcgccg
gacggcgcctggatcgcgtcggtcagcagccgggaccgcaccgcccgcatctggactccg
ggcggcacggcggccaccatgatccggctcgacggtgcgctgcagtgctgccggtggacc
ggcccgacccggctggccgtcggcggcgctcgcgggctgtacctgttcgacctcgcgggc
tga

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