Pseudofrankia inefficax: FraEuI1c_6635
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Entry
FraEuI1c_6635 CDS
T01354
Name
(GenBank) NB-ARC domain protein
Organism
fri
Pseudofrankia inefficax
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
NB-ARC
DUF4062
Beta-prop_Vps41
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_IFT140_1st
APAF1_C
Beta-prop_HPS5
Beta-prop_DCAF4
VID27
Dark_WHD
Motif
Other DBs
NCBI-ProteinID:
ADP84605
UniProt:
E3JAY4
LinkDB
All DBs
Position
8110506..8114648
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AA seq
1380 aa
AA seq
DB search
MDLIGGDQGATGGSGPNPPWRIFISHTSELARHPARLPFVVAAKRAITDSGHVAVDMSGF
EPEDSDPAEMCRRRVGDCSIYLGIIGFRYGSPVRGHEAVSYTELEFDTATALGLERLVFL
LDEKRTVGTHEWLADVSYGERQLAFRTRIMDDLVATSVASPEELEAKIIRALVGLQERRA
RAERRAAAAVLVHPPALPLRSRRPLEHVVERPELTGRLITALTSDGSAPVAVRGGGGFGK
STLATVIADRPEILARFPDGHIWMDIGPDLAGPRLAAKINECATWLGAVGPGPADPHLAG
VRLGDLLGERRLLIIIDDVWRAEQLQPFREGGRNCRRLVTTRDRAVLPMDAVLVDVDVMA
PGQAVRLLTEAVPGLDDDRAGPLAQRCGYWPVLLRLVAGHLHGMLLDGRPLDGALTEVTD
GLDEEGLAAFDDSTRRERAVAATVEASLRLLGEMDAFGDGALERFQDLAAFPRGATIPRD
LLDVLWRHTAGWGRLQTSRFCLRLTDLSLVLAVPGEDGGLRLHDVMHEYLQMQLGPRLPE
VHVRLLAARARDLPVEDGQPAWSQLPEQERYLWEHLAVHLAEAGERARLVALVQDLRWVA
AKIRLVGPASVEADMALLGAHPVALALARLVRQTANLRDTGDAPQAVVATLAAYAAGIEV
LAPAARRALRRLPGQALRPMVPPLPDQPDPALLRTLTGPIGHITGLAVADDESWLAAGGG
ADAGDGEGTVVIWHLPTGGERVLRAGHSGPVSALAASRDGSWLASADRDGTVRIWDVETS
RLRHTLTGHSGRVAILVAAPDGSWLASGGAGDGTVRIWNTADGTLRHVLPSAGAWISAMA
VGPDGHWLAVGAGDGSLRVWDPATGACSASTQAHAGWVSELAVEPGGSWLASGGGDGTVR
LWAPAALLAEGSSPPAPPARPSGAGGPAGPATLVAAPDGSWLASGGGDGRVRLWDPVHGV
ERRVLSGHAGDVTALVVAPDGSWLASAAGDGTIQVADPRAVSDRVLVPGHARPAHALVAA
PNGSWLASAGGDGTVRMWDPAAVGAERAEPVGRIRGVTAIESAGSDGWLAVGSGDGVIRL
WDAQAGAERAALTGHPASVRALAAPSDGRWLASLDDDNVARVWDPREGAHTRLASAGLTT
RVSALLADPRGSWLASGGPDAVVRLWDPVSGAERAVLPGHGQGVLALAAPADGSWLASAG
GDATVRVWDPAEGQGASPLHVFDGHTSRVQWLAAAPNGSWLASAGIDGTIRIWDVGTGTR
RLVLGGDLHDVWALAAAPDGSWLASGGADACVRIWDPVGGVERHVLTGHREGVVALAVSP
DGAWIASVSSRDRTARIWTPGGTAATMIRLDGALQCCRWTGPTRLAVGGARGLYLFDLAG
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atggatctcatcggcggagatcagggtgctacgggtggctccggaccgaacccgccgtgg
cggatcttcatcagccacaccagcgagcttgcccggcaccctgcgcgcctgccgttcgtc
gtggccgcgaaaagagccattacggactccggtcatgtcgcggtcgacatgtccggtttc
gagcccgaggacagcgatcccgccgagatgtgtcggcgccgggtcggcgactgctcgatc
tacctcggaatcattggattccggtacggctcccccgtgcgcggccacgaggccgtctcc
tacacggagctggagttcgacacggcgaccgcgctcgggctggaacgcctggtgttcctc
ctcgacgagaaacgcaccgtgggaacgcacgagtggctcgccgacgtcagctacggcgaa
cgccagctggccttccgcacccggatcatggatgacctggtcgcgacgtcggtcgcgtcg
cccgaggaactcgaagcaaagatcattcgcgcgctcgtgggcctacaggagcgccgggcg
cgggcggaacgccgggcggcggccgccgtcctcgtccacccgcccgcgctgccgttgcgg
tcacggcggcccctcgagcacgtcgtggagcggcccgagctgacggggaggctgatcacg
gcgctcacctcggacggctccgcgccggtcgccgtccggggcggtggcgggttcggcaag
tcgacgctggccaccgtcatcgccgaccggcccgagatcctggcccggtttcccgacggg
cacatctggatggacatcggccccgacctggccggcccccggctcgccgcgaagatcaac
gaatgcgcgacctggctcggggcggtcgggcccgggccggcggacccgcacctggccggc
gtgcggctgggcgacctgctcggcgagcgccggctgctgatcatcatcgacgacgtgtgg
cgggcggagcagctccagccgttccgggagggcgggcgcaactgccgccggctggtcacc
acccgcgaccgggccgtcctgccgatggacgccgtgctggtcgacgtcgacgtcatggca
cccggccaggcggtacgcctgctcaccgaggcggttcccgggctggacgacgaccgggcc
gggccgctcgcccagcgctgcggctactggccggtgctgctgcggctggtcgccggccac
ctgcacggcatgctgctcgacggccgcccgctggacggggcgctcacggaggtcaccgac
ggtctggacgaggagggcctggcggcgttcgacgacagcacccgccgcgagcgggccgtc
gcggcgaccgtcgaggcgagcctgcggctgctcggcgagatggacgccttcggtgacggg
gcgctcgaacgcttccaggacctggccgcgttcccgcggggcgcgacgatcccgcgggac
ctgctggacgtgctctggcggcacaccgccgggtggggccggctgcagaccagccggttc
tgcctgcggctgaccgacctgtccctggtcctcgccgtgcctggggaggatggcgggctg
cggctgcacgacgtcatgcacgagtacctccagatgcagctcggcccgcggctgcccgag
gtccacgtccggctgctcgccgcgcgggcccgtgacctgcccgtcgaggacgggcagccg
gcctggtcccagctgccggaacaggagcggtacctgtgggagcacctggccgtgcacctg
gccgaggccggcgagcgcgccaggctcgtcgcgctggtgcaggacctgcgctgggtggcg
gccaagatccgcctggtcgggcccgccagcgtggaggcggacatggcgctgctcggggcg
catccggtcgcgctcgcgctggcccggctcgtgcggcagacggcgaacctgcgggacacc
ggcgatgcgccgcaggccgtcgtcgcgacgctcgccgcctacgccgccggcatcgaggtg
ctcgcgccggccgcgcgccgcgcgctgcgtcggctgccgggccaggcgctgcggccgatg
gtgccgccgctgcccgaccagcccgacccggcgctgctgcggaccctgaccgggccgatc
ggccacatcaccggactggcggtggccgacgacgagtcctggctcgccgccggcggtggc
gcggacgcgggcgacggcgagggcaccgtggtgatctggcacctgcccaccgggggtgaa
cgggtcctgcgcgccggccacagcggtcccgtctcggcgctcgcggcctcccgggacggg
tcctggctggcgtcggccgaccgggacgggaccgtgcggatctgggacgtcgagaccagc
cggctgcggcacacgctgaccggtcacagcggccgggtcgcgatcctggtggcggcgccg
gacgggtcctggctcgcctcgggcggggcgggcgacgggacggtccggatctggaacacg
gcggacggcacgctgcgccacgtgctgccgagcgccggcgcctggatctccgcgatggcc
gtcggcccggacgggcactggctcgccgtcggtgccggcgacgggtcgctgcgggtctgg
gatccggcgaccggcgcctgctcggcgtcgacgcaggcacacgccggctgggtgtcggag
ctggcggtcgagccgggcgggtcctggctggcgtccggcggcggtgacggcaccgtgcgg
ctatgggctcccgccgcgctgctcgccgagggctccagcccgccggccccgcccgcgcgg
cccagtggcgccggcggtcccgccggcccggcgaccctggtcgcggccccggacggctcg
tggctggcctccggcggcggtgacggccgtgtgcggctctgggatccggtccacggcgtc
gagcgccgggtcctgagcgggcacgccggcgacgtcaccgcgctcgtcgtcgcgcccgac
ggctcgtggctggcctcggccgccggggacgggacgatccaggtcgccgacccgcgggcg
gtcagcgaccgtgtgctggtgcccggccacgcccgtccggcgcacgcgctggtggcggca
ccgaacgggtcgtggctcgcgtccgccgggggcgacgggacggtgcgcatgtgggacccg
gccgcggtcggggccgaacgggccgagccggtcggccggatccgcggggtgaccgcgatc
gagtcagccgggtccgacggctggctggccgtcggctccggcgacggggtgatccggctg
tgggacgcccaggcgggagccgaacgcgccgcgctcaccgggcacccggcctcggtccga
gccctcgccgccccgtccgacgggcggtggctcgcctcgctggacgacgacaacgtggcg
cgggtctgggatccgcgcgagggcgcgcacaccaggctcgcctcggccggtctcaccacg
cgggtctcggcgttgctggccgacccgcgcggatcgtggctggcctccggtgggccggac
gccgtcgtccggctgtgggacccggtctccggcgcggaacgcgcggtgcttcccgggcat
ggccagggcgtcctggcgctggccgcgccggccgacgggtcctggctcgcttcggcgggc
ggcgacgcgaccgtccgcgtctgggacccggccgaagggcagggcgcgtcaccgctgcat
gtcttcgacggtcacaccagccgcgtgcagtggctggcggcggcaccgaacgggtcctgg
ctcgcctcggccggcatcgacgggaccatccggatctgggacgtcggcacgggaacgcgc
cgcctggtcctcggcggcgacctgcacgacgtctgggccttggccgcggcgccggacggg
tcctggctcgcctcgggcggggcggacgcctgcgtccggatctgggatccggtcggcggg
gtcgaacggcacgtgctgaccggtcaccgcgagggcgtcgtggcgctcgcggtctcgccg
gacggcgcctggatcgcgtcggtcagcagccgggaccgcaccgcccgcatctggactccg
ggcggcacggcggccaccatgatccggctcgacggtgcgctgcagtgctgccggtggacc
ggcccgacccggctggccgtcggcggcgctcgcgggctgtacctgttcgacctcgcgggc
tga
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