Pseudofrankia inefficax: FraEuI1c_6688
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Entry
FraEuI1c_6688 CDS
T01354
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
fri
Pseudofrankia inefficax
Pathway
fri02010
ABC transporters
fri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FraEuI1c_6688
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FraEuI1c_6688
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fri02000
]
FraEuI1c_6688
Transporters [BR:
fri02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
FraEuI1c_6688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
ETF-QO_FixC_C
Motif
Other DBs
NCBI-ProteinID:
ADP84658
UniProt:
E3JB37
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Position
complement(8175970..8177226)
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AA seq
418 aa
AA seq
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MIRKRSTALAAMVAAGAMLLAAGCGSSGSSGPTVTGSGSAGATQTITVGVFADITGPAAS
GNKTVEAGVKAGTYYAARNGYKIKYVVGDTATNPTTALSIAQKFVTQDHVLAVIANSSLL
FTASNYLTAHNVPVIGISEDGPEWITSKNMFSISGPLQQTKVATTMGKFFKLVGVTNLAS
LGYAVSPISSESASASAASAEAAGIKVGYLNAKFPFGSTNVGPAVLQMKDAGIDGLVTST
DPDTGFELIKGLRDSGVKLKGALLPTGYGGDLIQAGPGALASAQNVYFLLGYEPVEMQTA
ATKQFVADLKSGGTTGEPTFAMYNGYVSIGLLVRALKAAGGTPSQAGLLKGLESIHDWNA
LGLYGSHTVDINDRVNVVSGPDNCSWMTKLVGDKFELVKGATPICGDVIPGKTVAAQS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtgatccgtaagcgcagtaccgccctagctgcaatggtcgccgctggtgcgatgctctta
gccgctggctgtggctcgtcggggtcgagcggcccgaccgtgaccggttccggctcggcc
ggggcgacccagaccatcacggtcggcgtgttcgctgacatcactggcccggcggcctcc
ggtaacaagaccgtcgaggccggcgtgaaggcggggacctactacgcggccaggaatggc
tacaagatcaagtacgtcgtcggcgacacggcgaccaacccgacgacggcgctctccatc
gcgcagaagttcgtcacgcaggaccacgtcctcgcggtgatcgcgaactcgtcgctgctc
ttcacggcgtccaactacctcaccgcgcacaacgtcccggtcatcgggatcagtgaggac
ggtcccgagtggatcacctcgaagaacatgttctccatctccggtccgctgcagcagacc
aaggtggcgaccacgatgggcaagttcttcaagctggtgggtgtcaccaacctggcttcg
ctgggctacgccgtctctccgatctcgtctgagtcggccagcgcctccgcggcgtccgcc
gaggccgcgggcatcaaggtcggctacctgaacgccaagttcccgttcggcagcaccaac
gtcggtccggcggtcctgcagatgaaggacgccggcattgacgggctcgtgacctccacg
gacccggacaccggcttcgagctcatcaagggcctgcgggactccggcgtcaagctgaag
ggcgcgctgctgccgaccggctacggcggcgacctgatccaggccggcccgggtgcgctg
gcgagcgcgcagaacgtctacttcctgctcggctacgagccggtcgagatgcagaccgcg
gcgaccaagcagttcgtggccgacctcaagagcggcggtaccaccggtgagccgacgttc
gccatgtacaacggctacgtctcgatcggcctgctggtccgcgcgctgaaggcggccggg
ggtaccccgagccaggcgggtctgctcaagggcctggagagcatccacgactggaacgcg
ctgggcctgtacggctcccacacggttgacatcaatgaccgcgtgaacgtcgtcagcggt
ccggacaactgctcctggatgacgaagctggtcggtgacaagttcgagctcgtcaagggc
gcgaccccgatctgcggcgacgtcatccccggcaagacggtcgcggcgcagtcctga
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