Pseudofrankia inefficax: FraEuI1c_6716
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Entry
FraEuI1c_6716 CDS
T01354
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
fri
Pseudofrankia inefficax
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fri03400
]
FraEuI1c_6716
DNA repair and recombination proteins [BR:
fri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
FraEuI1c_6716
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
zf-C2H2_15
Motif
Other DBs
NCBI-ProteinID:
ADP84685
UniProt:
E3JC96
LinkDB
All DBs
Position
complement(8214623..8215060)
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AA seq
145 aa
AA seq
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MARTRESWASSAGVRASMRSNKSRDTKPELALRSAVHGLGLRYRVGARPLPAVRRTGDLV
FPRVRVVVFLDGCFWHGCPRHHTVAKTNADFWAEKVRINRERDLNTDHVLEAAGWQVVRV
WEHEDPGVAAERVAEVVRTRRLTVS
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaggactcgggagtcgtgggcgtcctccgcgggcgtccgggcctcgatgcgctcc
aacaagtctcgcgacaccaaacccgagctggcgctgcgctccgcagtgcacggcctcggc
ctgcggtaccgcgtcggtgcacgaccgctgccggcggttcggcggacgggcgacctggtg
ttcccgcgggtgagggtagtcgtattcctcgacgggtgcttctggcacggctgtccgcga
caccacactgtggccaagacaaatgccgatttctgggccgagaaggtccgcatcaaccgg
gaacgggacctcaacaccgatcacgtccttgaggctgctggatggcaagtcgtccgggtg
tgggagcacgaggacccgggtgtcgctgcggaaagggttgcggaggtcgtccggacgcga
aggcttaccgtcagctga
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