Pseudofrankia inefficax: FraEuI1c_6865
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Entry
FraEuI1c_6865 CDS
T01354
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri03030
DNA replication
fri03430
Mismatch repair
fri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FraEuI1c_6865
03430 Mismatch repair
FraEuI1c_6865
03440 Homologous recombination
FraEuI1c_6865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fri03032
]
FraEuI1c_6865
03400 DNA repair and recombination proteins [BR:
fri03400
]
FraEuI1c_6865
Enzymes [BR:
fri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FraEuI1c_6865
DNA replication proteins [BR:
fri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FraEuI1c_6865
DNA repair and recombination proteins [BR:
fri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FraEuI1c_6865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
Rad17
AAA_16
AAA_30
Mg_chelatase
AAA_19
RepC
AAA_5
nSTAND3
AAA_14
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ADP84834
UniProt:
E3IUL8
LinkDB
All DBs
Position
8390127..8392628
Genome browser
AA seq
833 aa
AA seq
DB search
MSTALYNRYRPATFSQVVGQEHVTSALMQALRTGRLHHAYLFSGPRGCGKTSSARILAAS
LNCEKGPTPDPCGVCDQCVSIRTGSSMDVTEIDAASHGLVDDARDLRERAFFAPASARFK
IFVVDEAHMVTAAAFNALLKVVEEPPSYLKFVFATTEPDKVIATIRSRTHHYAFRLVPPG
VLRDHLASVAAQEGVDVDPAVLPLVVRAGAGSVRDSLSVLDQLLAGAGSDGLRYDRAVAL
LGMTDGVLLDETVDALAARDGATLFTVVDKVVGSGHDPRRFTADLLDRMRDLIMIKAVPD
AVERGLLDAFSADQIERMKAQAGRVGPAELSRTADVLHAGLAEMRGTASPRLLLELVVAR
ALLPAAAAGDPAALLTRLERLERGLAAGPPPAAAAARAGGPLTPAGPGAPDVPPAPARPP
APAAEPAGSPRQDTSWAQPPAAPAGPMPAPAAQPSAAQQAGGWSGGPSTSPGRPGGPPPP
APQTPPAPQAPAPQAPAAQPAVAQPAPAAAGGEGAEAATVRAVWDQVLAATRRRKQTTFA
LLTEYASVLDARGGELFLAFSAPRIAQMFGQGSHIDVLCEALAEQLGGGWRVTIGEPGGG
RPAGGSRGGPNRPPVAPSGGGFPSASGGRPNPTPPPNSTPRPPAGFTPATPGGGLASQTS
GGFDTAASLGGGAPSGLGTGGAAALGGYGSGGGPGGGPVSSASGPAVATAVRGPLGPGLD
ASAGSPHQAQVAPGAGHPGIGTSAYAHQAGASLAGAPSGGGIVPLGGHLGGAAPAAADLA
TAGVAAPSTADEPSLDDDDAPAHAGSTLSGEAAAMELLRVGLGATVMEQRGAS
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagcgctgtacaaccggtaccggcccgcgacattcagccaggtcgtgggccag
gagcacgtgacctccgccctcatgcaggcgctgcggaccgggcggctacaccacgcctac
ctgttcagcggcccgcgtggctgtgggaagacgtcgtcggcccggatcctcgccgcgtcg
ctgaactgcgagaaggggccgaccccggatccgtgcggggtctgcgaccagtgcgtgtcg
atccgcaccggctcgtcgatggacgtcaccgagatcgacgccgcctcgcacggtctcgtc
gacgacgcccgtgacctgcgcgagagggccttcttcgcgcccgcgtcggcccgtttcaag
atcttcgtggtggacgaggcgcacatggtcacggcagccgcgttcaacgcgctgctcaag
gtcgtcgaggagccgccgtcctacctgaagttcgtcttcgccaccaccgagccagacaag
gtgatcgccaccatccggtcccgcacgcaccactacgcgttccggctggtgccgccgggg
gtgctacgcgaccacctggcctcggtggccgcgcaggagggcgtcgacgtcgacccggcg
gtgctgccgctggtggtccgggccggcgccggctcggtgcgcgactcgctgtcggtgctc
gatcagctgctcgccggcgccggctcggacgggctgcgttacgaccgcgcggtggccctg
ctcggcatgaccgacggcgtgctgttggacgagaccgtcgacgcgctggcggctcgggac
ggcgcgaccctgttcaccgtcgtcgacaaggtcgtcggctcggggcacgacccgcgtcgg
ttcaccgccgacctgctcgaccggatgcgcgacctgatcatgatcaaggcggtgccggac
gcggtcgagcgggggctgctggatgcattctccgccgaccagatcgagcggatgaaggcg
caggccggccgggtcggcccggccgagctgtcccggaccgcggacgtgctgcacgccggc
ctcgcggagatgcgagggacggccagcccgcggctgttgctcgagctggtcgtggcgcgg
gccctccttcccgccgccgcggcaggagatccggccgccctgctgacccggctggaacgg
ctggagcgcggcctcgccgccggcccgccgccggcagccgccgcggcgcgggccgggggc
ccgctcacccccgccgggccaggtgccccggacgtgccgcccgcccccgcgagaccgccc
gcccccgccgccgagcctgccgggtcgccccggcaggacacgtcatgggcgcagcccccg
gcggccccggccggaccgatgcccgcgcccgcggcccagccgtccgccgcccagcaggcc
ggcggctggagcggcggcccgagcacgtcacccggccggccaggtggcccgcctccccca
gccccacagacaccaccagccccacaggcgccagcccctcaggcgccagccgcccagccg
gcggtcgcccagccggcccctgccgcggccggtggcgagggcgccgaggcggccaccgtg
cgggccgtgtgggaccaggtgctcgcggcgacccggcggcgtaagcagacgacgttcgcc
ctgctcaccgagtacgccagcgtccttgacgcccgcggcggcgagctgttcctcgccttc
tcggcgccgcggatcgcgcagatgttcggccagggcagccatatcgacgtgctctgcgag
gcgctcgccgagcagctcggcggtggctggcgcgtgacgatcggggagcccggcggcggc
cgcccggccggcggctcccgtggcgggccgaaccgaccgccggtcgcaccatccggcggt
ggcttcccgtcggcgtccgggggccggcccaacccgaccccgccgccgaactccaccccc
cgaccgccggccggattcactccagccacgcccggcggcggtcttgcctcccagacctca
ggcggcttcgacacggccgcctcgctgggcggcggtgcgccgtcggggctgggcaccggt
ggggcggcggcgctgggcgggtacggcagcggcgggggcccgggcggcggtccggtctcg
tcggcttccggccccgccgtcgccaccgctgtccgggggccgctcggtccaggcctggac
gcgtccgccggcagcccgcaccaggcccaggtcgcgcctggtgctggccacccggggatc
gggacgtccgcctatgcccaccaggccggcgccagcctggcgggcgcgccctccggcggc
ggcatcgtcccgctcggcggccacctgggcggcgcagcaccggccgccgccgacctggcc
accgcgggggtcgccgcgccgagcacagccgacgagccctccctggacgacgacgacgct
cccgcccacgcgggctcgacgctctcgggtgaggccgccgccatggagctcctgcgggtc
gggctaggcgccaccgtcatggagcagcgcggcgccagctga
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