Pseudofrankia inefficax: FraEuI1c_6981
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Entry
FraEuI1c_6981 CDS
T01354
Name
(GenBank) Peptidoglycan-binding domain 1 protein
Organism
fri
Pseudofrankia inefficax
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PG_binding_1
KAP_NTPase
PG_binding_3
Clp_N
SH3_16
Motif
Other DBs
NCBI-ProteinID:
ADP84948
UniProt:
E3IW20
LinkDB
All DBs
Position
complement(8528039..8531749)
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AA seq
1236 aa
AA seq
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MMAASQSATERPARSIRLLHGAVGGPDVELLQDALAAVGYDPGRLDGIYGPLTASAVRRY
QGVRGIAQDGIVGPATWEALAAEPNSPLAGRPLRVTIAGAVAGDDVRRVQEGLSSAGFDP
GPIDAVYGPMTARAVRRFQLVHGLGADGIVGPRTLAALTERRLGLTPSVASVLQAVGDEP
VSPSGLARTILRDHPHYAGGRASEVTFATEPAEVRFRAVRWLGHVRALFRPGLVRLLRGR
FVVVGLCLLDPSLAGRLGRVFFDELIGELHYDGQPGGEFQASLTARGRRAADRLNGSPAR
SLAQLTPAARRAFGHAEALRLDAGAQHVHTDHLMAGLQRAGTGSALRLLSRAHLEADDLT
ALLGETSGHRLPETSSPRRLDEVPPLSSHAAEAWEHAFRVADAIGSEVVRSRYLLHGLLS
VDGCTLVHALAGRGVRADGIDGWDEPVPAAADQPMLLAGARADTVPEPGEGRLRDADRLG
AADYVEMLASVLVAKDTPPPLAVGLFGSWGSGKSFFMAQLQERIDELAAGALLAAKADEE
TPFHGRIRQIRFNAWHYADANLWASLATALFDGLVRPTRADATAQDAAVAGELEKARNTV
AAKRAEREKKDWQARAAERAAGRVTAVLTEPLRIAIREFRDRPELWQQVRALGRAATGDE
AGVPRADTETDAAAERTIAALGGVEDLVGKIRAVRLLATEELVGQPRRRWLTLASLLVLL
GAAGAVAALTGWPPGAKVAAFAVPFLAPAAVGVTAATRLLRLVREAREQRELRVFQARDA
AARARVEEEEAEAWVALLDRRLAEQRNKGARLRQFVRARAASSDYRDQLGVVSKLRRDLE
QLAELIEIGPHVQPVGGPAVVTSPADRDPTGADPVDTVRVTDPATEAAARAKQREVEAAV
EDLADWQVRRIFLYIDDLDRCSHGTVVEVLQAVHLLLAFKLFVVVVGVDSRWLTHSLRVH
YAELLEEPSDYLEKIFQVPFALPPMETDHYRSLIADLVAQRSPAWSVATARSSDDESDRR
GQTGPEPPVDESPPGDRATPPPSTPPPDDPELDARPAGLPPPPPEALLISAAEASLLGEL
SEAVATPRSAKRLINIYRMLRVSVRPDERDGFTPGRGNEYQAVIVLLGILVGRPSEAAAV
FESVRTAAPDDEIWDILAAYEDVARVLAPLRDRRRVSVTHVDPYQRWAPRVGRFAFIHHA
VPPTGGPPRPALAAASRPPLQIVPDSPPGTPAPRDR
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
gtgatggctgcgagtcagagcgcgacggagcgaccggctcgatcgatacggctgctgcac
ggcgccgtcggggggcccgacgtcgagctgctccaggacgctctggcggcggtcggctat
gacccgggccggctggacggtatctacggacccttgaccgcttccgcggttcgccgctac
caaggggtccgcggtatcgcccaggacggcattgtcgggccggcgacctgggaagctctg
gcggccgagccgaattcgccgctcgccggccggccgctgcgggtgaccatcgccggggcg
gtcgcgggagacgacgtccggcgagttcaggaggggctgagctccgcgggtttcgacccg
ggaccaatcgatgctgtttacgggccgatgacggcccgcgccgtacgtcgatttcagctc
gttcacggcctcggcgccgatggcatcgtcgggccgcgcaccctggcggcgttgacggag
cggcggctcggtctgaccccttcggtggcctcggtcctgcaggctgtcggggacgagccg
gtcagcccttctggcctggcccggacgattctgcgggaccatccccattacgccggtggt
cgtgccagcgaggtcacgtttgccaccgaaccagccgaggtgcgctttcgcgcggttcgc
tggctcgggcatgtccgggccctgttcaggcccggcctggtgcgtcttctgcgcggccgg
tttgtcgtcgtcgggctctgccttctcgacccgagcctggccggccggctgggccgggtt
ttcttcgacgagctgatcggtgagcttcactacgacggccagcctggcggcgagttccag
gcttcgctgaccgcccgcggccgacgggcagccgaccggttgaacggctcgccggcacgg
tcgctcgcccaactcactccggccgcgcgccgcgcgttcggccacgcggaggcgcttcga
ctcgacgcgggcgcgcaacacgtgcacaccgatcacctgatggccggtctgcaacgggcg
ggcaccggctcggccctgcggctgctgagccgagcccacctggaagcggacgacctcacc
gcgctgctcggcgagacgagcgggcatcggctgcccgagacgtcgtcgccccggcggctt
gacgaggtgccacccctgtccagccacgccgccgaggcgtgggagcacgccttccgggtc
gccgacgcgatcggttcggaggtcgtccggagccggtacctgctgcacggcctgctgtcc
gtcgacgggtgcacgctcgtccacgcgctggccgggcggggcgtgcgcgccgacgggatc
gacggctgggacgagcccgtgcctgccgcggccgaccaaccgatgctgctcgccggggcc
cgcgccgacaccgtgcccgagccgggggaagggcggttgcgggacgcggaccggctgggg
gcggcggactacgtcgagatgctcgcctcggtcctggtagcgaaggacacgccgccaccg
ctggccgtcgggctgttcggctcgtggggcagcggcaagagcttcttcatggcccagctg
caggagcggatcgacgagctggcggccggcgccctgttggcggcgaaagcggacgaggag
acgccgttccacggcagaatccgccagatcaggttcaacgcgtggcactacgccgacgcg
aacctgtgggccagcttggcgacggcgctgttcgacggcctcgtccggcccaccagggca
gacgccaccgcgcaggacgccgcggtcgccggcgagctcgagaaggcccggaacaccgtc
gccgcgaagcgggccgagcgggagaagaaggactggcaggcgcgagcggcggagcgggcg
gccggacgggtgacagccgtcctgaccgagccgctgcggatcgccatccgtgagttccgg
gaccgtcccgagctgtggcagcaggtgcgcgcgctcggccgggcggcgaccggcgacgag
gccggcgtgccccgggcggacaccgagacggacgcggctgccgagcggacgatcgccgcg
ctcggcggggtcgaggacctcgtcgggaagatcagagctgtccgcctgctcgccaccgag
gagctggtgggccagccacggcggcggtggctgacgctggccagcctgctcgtcctcctg
ggcgcggcgggcgccgtggcggcgctcaccggctggccgcccggcgcgaaggtcgcggcg
ttcgccgtcccgttcctcgcgccggccgccgtcggcgtgacggccgcgacgcgcctgctg
cgcctcgttcgggaggcgagagagcaacgggagctcagagtctttcaggcccgggacgcg
gccgcgcgggctcgcgtcgaggaggaggaagccgaggcctgggtcgcgctgctcgaccgc
cgcctggccgagcagcggaacaagggggcgcggctacggcagttcgtccgcgcccgggcg
gccagctcggactaccgcgaccagctcggggtcgtttccaagctccgccgcgacctggag
cagctggcagagctcatcgagatcggcccccacgtccaacccgtcggcgggcccgcggtc
gtgacgagcccagcggaccgggatccgaccggcgcggacccggtggacacagtccgcgtg
accgatccggcgacggaggcggcggcgcgggcgaagcagcgggaggtcgaggccgccgtc
gaggacctggcggactggcaggtacgacggatcttcctctacatcgacgacctcgaccgc
tgctcgcacggcacggtcgtcgaggtgcttcaggccgtgcacctcctgctcgcgttcaag
ctgttcgtcgtcgtggtcggcgtggacagccgctggctcacccattccctgcgcgttcac
tacgcggaactgctcgaggagccctccgactatctggagaagatcttccaggtcccgttc
gcgctgcccccgatggagacagaccactaccgaagcctgatcgccgatctcgtcgcgcag
agatcccccgcctggtccgtggccaccgccaggtcttcggacgacgagtcggatcgccgc
ggacagaccggcccggagcctcctgtcgacgagtcgccgcctggggaccgtgcgacaccg
ccgccatcgacgcccccacctgacgaccccgagctggatgcgcgtccggccggtctgccg
cctccgcccccggaggcgctgctcatctccgccgccgaggcgtcgttgctcggcgagctg
agcgaggccgtggcgaccccccgatccgcgaaacgcctgatcaacatctaccgcatgctg
cgggtatccgttcgtcccgacgaacgggacggtttcacgcctggccgcggcaacgagtac
caggccgtgatcgtgctcctcgggatcctggtcggacggccgtccgaggccgccgcggtc
ttcgagagcgtgcggaccgcggcgcccgacgacgagatctgggacatcctggccgcctac
gaggacgtggcgcgggtgctcgcgcccttgcgggaccggcggcgggtgagtgtcacccat
gtcgacccctaccagcgctgggcaccgcgggtgggccgtttcgccttcatccaccacgcc
gttccaccgacaggcggcccgccccgaccggcgctggccgcggcctcccggcctcccctc
cagatcgttccggattcccctccagggacgccggccccgcgcgaccggtag
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