Francisella sp. LA112445: FIP56_00620
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Entry
FIP56_00620 CDS
T08878
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
frl
Francisella sp. LA112445
Brite
KEGG Orthology (KO) [BR:
frl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
frl03016
]
FIP56_00620
Enzymes [BR:
frl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FIP56_00620
Transfer RNA biogenesis [BR:
frl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FIP56_00620
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
QIW09264
UniProt:
A0A7L5CAQ2
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All DBs
Position
127390..129246
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AA seq
618 aa
AA seq
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MQKNSLVIFKSKPAKVVDVLDKKIEIEILDGKNIKLPPKNVQLLLQNDSDFELESLEQLG
ISELEMTWELLQEQQSTTIEELCELLFENVGIDEAYTVWLLVSQGEYFSFDDDFNIVIHS
LGERDAIVKERQEKQKKEQELNDFIERVKQKSYAPEDEKFLKEIAALATLKTPNCRLFKY
LNMEESENSAYKLLLDVGYWDEFYNPYLYRYKAELESNPAEFVYNSDSDNNRVDLTHLTA
YAIDDEGSNDPDDAISWDSDRNKMWVHIADPSSSISFGDEVDLEARARGSNLYVPEKIVS
MLPQKATEELGLGLKDISPALSVGFTVSEQGYIQDIEICFSKIKVTRHSYEFAEEHIKDL
ELGNIVAYAKYFTHKRLSQKAVELDFPEIKISLDEDKNVKLTDLPRLNSRTLIRDTMLMA
GVAIGQFCIENNIAVPFSTQPEHDLEQEHLESLDSIADMFATRKKLQRGKYSTTPARHAG
MGLDTYVQVTSPLRRYLDLLIHYQLRSFLSQKILLQAEEVDNIIAQVDIPIRTNRQTERF
SNSHWKLVYLSQNPNLEFEATVIEKLERGRLMVSIADLAMTKKLSVSGKYELNDIFKLQN
TSVNLVTQEAFFKVIEES
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaattctttagtcatctttaaatcaaaacctgctaaggttgttgatgtttta
gataaaaaaatagaaattgagatccttgatggtaagaatataaagttaccacctaaaaat
gttcaactacttttacaaaatgatagtgattttgagcttgaaagtctagagcaattaggt
atctctgagttagaaatgacttgggaattactacaagagcaacaaagtacgactatagaa
gagttatgtgagcttttatttgaaaatgtaggtatagatgaggcttatactgtatggttg
ctagtatctcagggtgaatattttagctttgatgatgattttaatattgttattcactct
ttaggtgagcgtgatgcaattgttaaagaaaggcaagagaagcaaaaaaaagagcaagaa
ctaaatgattttatagagcgagtaaaacaaaaaagttatgctccagaggatgagaaattc
ttaaaggagattgctgctcttgcaacactaaaaactccaaattgtcgcttatttaaatat
cttaatatggaagagtctgaaaatagtgcttataagcttttgctagatgtgggctattgg
gatgagttctataatccatatctatatagatataaagcagagcttgaaagtaaccccgca
gaatttgtatataattctgattcagataataatagagtcgacttaacacacttaacagct
tatgcaattgatgatgagggtagtaatgaccctgatgatgcaataagctgggattcagat
agaaataaaatgtgggtgcatatagcagatccatcatcaagtataagttttggtgacgaa
gtagatctagaagcaagagcaagaggctcaaacttatatgttccagaaaagatagtttct
atgctgcctcagaaggcgactgaagagttagggttagggttaaaagatatctctccagca
ttatctgtaggttttacagttagtgagcaaggatatattcaagatattgaaatatgcttt
agtaagataaaagtaacaagacattcatatgagtttgcagaggaacatatcaaagattta
gagcttgggaatatagttgcttatgcaaaatactttacacataagcgcttgtctcaaaaa
gctgtagagcttgatttccctgaaattaagataagccttgatgaagataaaaatgttaag
ttaacagatttaccaagactaaactcaaggactcttatcagagatactatgctaatggca
ggtgttgctataggccagttttgtatagagaataatattgcagtgcctttttcaacccaa
cctgaacatgatctagagcaggagcatttagaaagtcttgactcaattgcagatatgttt
gctacacgtaagaagttacaaagaggtaagtattcaacaactcctgcaaggcatgctggt
atggggttagatacttatgtacaggttacaagtccactaagaagatacctagatttgctt
attcactatcagcttagaagtttcttaagtcaaaaaatactattacaagcagaagaagtt
gataatataattgctcaagttgatattcctattcggacaaatagacagacagaacgtttt
tctaattcgcattggaagctagtttacttatcgcagaatccaaacttagaatttgaggca
actgtgattgaaaaattagaaagaggtcgactaatggtttctatagcagatcttgcaatg
actaaaaaactttctgtaagtggaaagtatgagttaaatgatatttttaaattacaaaac
acctctgtaaaccttgtaacacaagaggctttctttaaggttatagaagaaagttaa
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