Francisella sp. LA112445: FIP56_01320
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Entry
FIP56_01320 CDS
T08878
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
frl
Francisella sp. LA112445
Pathway
frl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
frl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FIP56_01320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
frl03021
]
FIP56_01320
03400 DNA repair and recombination proteins [BR:
frl03400
]
FIP56_01320
Enzymes [BR:
frl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FIP56_01320
Transcription machinery [BR:
frl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FIP56_01320
DNA repair and recombination proteins [BR:
frl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FIP56_01320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
POLH-Rev1_HhH
DUF4094
Motif
Other DBs
NCBI-ProteinID:
QIW09393
UniProt:
A0A7L5CB57
LinkDB
All DBs
Position
254420..255391
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AA seq
323 aa
AA seq
DB search
MSNNNSNQEFLPNIQLKEDLGALGYKVQLSPVEKGMAHILGNSIRRVLLSSLPGASIIKV
NIKDVLHEYSALEDVKEDVVEIVSNLKKVAIKLDKGVESVELELSVDKAGVVTAGDFKTT
QGVEIINKDQPIATLTNQREFSLVATVDYGRNVGILSAVPIELDRVGDIAVDADYNPIKR
VAFEVIDNGDSDILEVFLKTNGTVEPLAAVTKALEYFCEQMSVFVSLKVPSNGKTGDALL
DSNIDPILLKPIDDLELTVRSSNCLRAENIKYLGDLVQYSESKLMKIPNLGKKSLNEIKQ
ILIDNNLSLGVQIDNFRELVEGK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaataataattcaaaccaagaatttttacctaatatacagcttaaagaggattta
ggtgctttaggatataaagtacagctttctcctgtagaaaaaggtatggctcatatcctt
ggcaactctattagaagggttttattatcttctcttcctggtgcatctattattaaagta
aatattaaagatgtattacatgagtattctgctttagaagatgtcaaagaagatgttgtc
gaaatcgtttctaacttaaagaaagtagcaatcaaacttgacaaaggcgttgaaagtgtt
gagttagagttatctgttgataaagcaggtgttgttacagctggtgactttaagacaact
caaggtgtagagattataaataaagatcaacctatagctactttgacaaatcaaagagag
ttcagtttagttgcaacagttgactatggcagaaatgttggaatactttcagctgtacca
attgaactagacagagttggtgatatagctgttgatgcagactataacccaatcaaaaga
gttgcatttgaagtaattgataatggtgatagtgatattctagaagtatttttgaaaaca
aatggtactgtagaaccactagcagctgttacaaaagctttagaatatttttgtgagcaa
atgtcagtttttgtatctcttaaagtaccaagcaatggtaaaactggagatgctttatta
gattctaatattgatcctatacttcttaaaccaattgatgacttagagcttactgtaaga
tcatctaactgtttaagagctgagaacatcaagtatcttggtgatcttgttcaatacagt
gagtctaaacttatgaagatacctaatttaggtaaaaaatctctaaatgagattaagcaa
atattgatagacaacaacttatctctaggtgttcagattgataactttagagagttagtt
gaaggaaaataa
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