Francisella sp. LA112445: FIP56_05685
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Entry
FIP56_05685 CDS
T08878
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
frl
Francisella sp. LA112445
Pathway
frl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
frl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIP56_05685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
frl03019
]
FIP56_05685
Enzymes [BR:
frl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FIP56_05685
Messenger RNA biogenesis [BR:
frl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FIP56_05685
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
HI1480
MerR-DNA-bind
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QIW10207
LinkDB
All DBs
Position
complement(1169277..1170620)
Genome browser
AA seq
447 aa
AA seq
DB search
MQFSDLGLNSSICSALDKKGYTKPTTIQEKAIPLILKGNDVMASAQTGTGKTAGFTLPVI
QKLLDQPKAQANKIKVLVLTPTRELAAQIQDQVRLYGENTHIRSAVVFGGVSINPQMMKL
RKGVEILIATPGRLLDLYGQNAIKFDSLNTLVLDEADRMLDMGFINDLKRIHKLLPKKIQ
TLMFSATFSPEIKNLAHEFLSNPQSVSADVVNTTVKKITQKIYTLDKANKINALIALIKE
QDLHQVLVFSRTKHGANKISEKLNNADITSSAIHGNKSQTARTKALADFKNKEINVLVAT
DIAARGIDIAQLPCVINLDLPNVAEDYVHRIGRTGRAGQDGLAISLVSADEVESLSNIEH
LIGHLLPREELEGFEATHNVPVTSMSRKTKAKKIDEVKIIAAKRANKNNRNSTQKKTSNH
NNDFAKKIRQKINANKSVRKSKGEVSN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctcagacttaggtttaaattcttcaatttgtagtgctttagataaaaaaggt
tacacaaaaccaactaccattcaggaaaaggcgatcccattaattttaaaaggtaatgat
gttatggcatcagcacaaactggtactggtaagacagcaggcttcacattgccagttata
caaaagcttttagatcaacctaaagcccaagcaaataaaattaaagttttagttctaact
ccaactagagagctagcagctcagattcaagatcaagttagattatatggggaaaatact
catatacgctcagcagttgtatttggaggagtaagtataaatccacaaatgatgaagcta
cgtaagggtgtagaaatattaatagctacaccaggtaggttacttgatttatatggtcaa
aatgctattaaatttgatagcttaaatactctagttcttgatgaagcagatagaatgtta
gatatgggattcataaatgatttaaaaagaattcataaacttttacctaaaaagatccaa
actttaatgttttcagctaccttctcaccagagattaaaaatttagcccatgaatttctt
agtaaccctcagtctgtatcagcagatgttgtaaatactactgtcaaaaaaattacacag
aagatctacactttagataaagccaataaaattaacgcattaatagctttgatcaaagag
caagacttgcatcaagtattggttttttctcgcacaaagcatggcgcaaataaaatctca
gaaaaacttaacaatgcagatataacaagtagtgctattcatggtaataaaagtcaaact
gctcgtacaaaggcattagcagattttaaaaataaagaaataaatgtactagttgctaca
gatatagctgcccgaggcattgatattgcacaacttccatgcgttataaatcttgattta
ccaaatgtggctgaagattatgttcataggattggtaggactggtagggcaggtcaagat
ggtttagcaatctctttagttagtgcagatgaggtagaatcattatcaaatattgagcac
ttaataggtcatcttttaccacgtgaggagttagaaggattcgaggctactcataacgta
cctgtgactagtatgtcgcgtaagactaaagctaaaaaaattgatgaagttaaaataatt
gcagcaaaaagagctaataagaataatagaaatagtactcaaaagaaaacttctaaccat
aataacgactttgctaaaaaaattagacaaaaaattaacgctaataaaagtgttagaaaa
tcaaaaggtgaagtttcaaattaa
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