Francisella sp. LA112445: FIP56_06800
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Entry
FIP56_06800 CDS
T08878
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
frl
Francisella sp. LA112445
Pathway
frl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
frl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FIP56_06800 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frl03400
]
FIP56_06800 (uvrB)
DNA repair and recombination proteins [BR:
frl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIP56_06800 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FIP56_06800 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
eIF3_p135
DUF87
Microtub_bd
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIW10423
LinkDB
All DBs
Position
complement(1397874..1399880)
Genome browser
AA seq
668 aa
AA seq
DB search
MDKFNLVTKYSPSGDQPEAIRSLVDGINNGLHHQVLLGVTGSGKTYTMANVIQQTQKPCL
ILAHNKTLAAQLYSEFKQYFPDNAVEYFVSYYDYYQPEAYVAASDTYIEKDSSVNEHIEQ
MRLSATKAILERNDVIIVATVSAIYGLGDPEQYMQMLLHLKVGEELGLKKAQTKLIEMQY
SRNDMDFSRGSFRVRGEILDIFPADSEKDAIRVEFFDDEIEAISIIDSLTSKKIKSLHRA
TIFPSTHYVASKERKEIVIEEIKKELKERVKYFEEEGKLLEAQRIEQRTKYDIEMIQELG
YCTGIENYSRLLSGRAPGDPPPTLIDYLPENALVIVDESHATLPQFGGMYKGDLSRKSNL
VNYGFRLPSALDNRPLKFDEFEKLLPQTVYVSATPANYELDKSENTVEQIIRPTGLLDPE
VFVRPVAIQVEDALSEINKAIAREERVLITTLTKKMAENLTEYLSEHGVNVRYLHSDIDT
VERVQIIHDLRHGVFDILVGINLLREGLDMPEVGVLLIFDADKEGFLRSEKSLIQTIGRV
ARNQNGRAILYADVVTKSMKKAMDETLRRRHLQDEYNKKNNITPKTIIKNIDDMLDSSPE
MQKRAYKNNSRLKVDDVDVSAILGMTEASKVIKALEKRMRAHAKELEFEKATLIRDKISE
IKQKFINL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggataaattcaatttagtaacaaaatatagtccaagtggtgatcaaccagaggcaata
agatcattagtagatggtattaataacggtttgcatcatcaagttttattaggggttaca
ggttctggtaagacttatacaatggcaaatgtaattcagcaaactcaaaaaccatgctta
attttagctcataacaaaactctagcagcacagctatattctgaatttaaacagtatttt
cctgataatgcagttgagtattttgtttcatattatgattactatcaaccagaggcgtat
gttgcagcatctgatacgtatatagaaaaagattcatcagtaaatgaacatattgagcaa
atgcgtttatctgcgacaaaagcaattttagagagaaatgatgtaataatcgtagcaaca
gtgtctgcaatttatgggctaggtgaccctgagcagtatatgcaaatgcttttgcattta
aaagtaggcgaagagttagggcttaaaaaagctcaaacaaagctaatagaaatgcagtat
tcacgtaatgatatggattttagtcgcggaagttttcgtgttagaggtgaaatattagat
attttcccagcagattctgagaaagatgctatcagagtagagttctttgatgatgagata
gaggcaattagtattatcgattcattaacttcaaaaaagattaaatctcttcatagagca
acgatatttcctagtactcactatgtagcctctaaagaacgtaaagaaatcgtaatcgag
gaaataaaaaaagagttaaaggaaagggttaagtattttgaagaggaaggtaagcttctt
gaggctcaaagaattgagcaaagaacaaaatatgatatcgagatgatacaagaacttggc
tattgcaccggtattgagaattattcaagactactgtctggtagagctccgggagatccg
ccacctacattaatagattatttaccagaaaatgctcttgttatagttgatgagtctcat
gcgacattacctcagtttggaggtatgtataagggtgatctatcgcgaaaatcaaactta
gttaattatggttttaggttaccttcagcattagataatagacctctaaaatttgatgaa
tttgaaaagcttttgcctcaaactgtttatgtctcagcaactcccgcaaattatgagtta
gataaatctgaaaatactgtcgaacagattattcgtccaacaggactacttgatccagag
gtttttgttcgtcctgttgctatacaggttgaagatgctttatctgagataaataaagca
atcgcaagagaagaaagagtattaatcacaactttaactaagaaaatggcagaaaacctt
actgaatatttatctgagcatggagttaatgttagatatttacactcagatatagataca
gttgagcgtgtgcagattattcatgatttgcgtcatggcgtgtttgatatacttgtaggg
ataaaccttttaagagaaggtttagatatgccagaagttggggttttacttatatttgat
gctgataaagagggctttttacgttctgaaaaatcacttattcagacgattggtagggtt
gcgagaaaccaaaatggtcgagcaattttatatgcagatgtagtcacaaaatcaatgaaa
aaagcgatggatgagactttgcgccgtcgtcatcttcaggatgaatataataagaagaat
aacattacacctaagacaattattaaaaatattgatgatatgcttgatagttcaccagag
atgcaaaaacgagcatataaaaataattcgcgtttaaaggttgatgatgttgatgtttcg
gctatactaggtatgacagaagctagtaaggttataaaagctctagaaaaacgtatgcgc
gcccatgcaaaagaactagaatttgaaaaagcaaccttgattagagacaaaatttctgag
ataaaacaaaagtttattaatttataa
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