Francisella sp. LA112445: FIP56_06805
Help
Entry
FIP56_06805 CDS
T08878
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
frl
Francisella sp. LA112445
Pathway
frl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
frl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FIP56_06805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frl03400
]
FIP56_06805
Enzymes [BR:
frl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
FIP56_06805
DNA repair and recombination proteins [BR:
frl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FIP56_06805
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FIP56_06805
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FIP56_06805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Exonuc_X-T_C
Ead_Ea22
Motif
Other DBs
NCBI-ProteinID:
QIW10424
UniProt:
A0A7L5CEC0
LinkDB
All DBs
Position
complement(1399881..1401329)
Genome browser
AA seq
482 aa
AA seq
DB search
MFDNQTFLFYDLETSGINNSFDQVLQFAAIRTDLDFNEIQRFNFFVKLNPDTTPSPMATI
THHISIAQANTGISEYDAIRKIHKIINTPGTISIGYNTLGFDDEFLRFAFYKNMLPPYTH
QFKNNCSRADLFPIVACYSAFFKEGLMWPKIIDNEGQEKISLKLENLNQENNFYSGGRAH
DAITDVIVTVELAKKLKSANPKMWQFLLDKFNKQNDENTLSQLDVGVEIENHGYKQAIAI
SGIFGSKNNFTSAILDLGQHRHYKNQEIFLRLDSYLFSEFIEEFGSLEAEHWRLTINKKW
GDIPLILPAKTRFVGKLPQERLELIKANKEFIKSNPETFANFVDYVLEYKYSEIENIDVD
AAIYQSDFMTSADERGCDKFHNSAIYQKAQMLSQLPGKLYDRAVRIIGRLDFSKLPEKAQ
MEFQEYLNKIVSLDNDELLVDHRGKTRKTLEDIYQEMQDVRSNRDLTEEQQALLYELEEY
LF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatcagactttcttattttatgacttagagacaagtggtataaataactct
tttgatcaggttttacaatttgccgcgattaggacagacttagattttaatgagatccaa
agatttaatttctttgttaaactaaatcctgatactactccatcaccaatggcaacaatc
acgcatcatatatctattgctcaagcaaatacaggaatatcggagtatgatgctatccga
aaaattcataaaataataaatactccaggaactataagtattggttataacactcttggt
tttgatgatgagtttttaaggtttgctttttataaaaatatgctaccgccgtacacacat
caatttaagaataattgttctagagctgatttatttccgatagttgcctgttatagtgca
ttttttaaagaggggttaatgtggcctaaaattatagataatgaaggccaagaaaaaata
tctctaaaattagaaaatctaaatcaagagaataacttttatagtggtggtcgagcacat
gatgctattacggatgtaattgtgacagtcgagcttgctaaaaaattaaaatcagcaaat
ccaaagatgtggcagtttttattggataaatttaataaacaaaatgatgaaaatactttg
tcacagttagatgtcggtgttgaaatagaaaatcatggatataagcaagctatagctata
agtggtatttttggctctaaaaataatttcacatctgcaatattagacttaggtcaacat
agacactataagaatcaagaaatattcttacgtttagatagttatctttttagcgagttt
attgaagaatttggaagtttagaggcagagcattggcgtttgacaattaataaaaaatgg
ggtgacattccattgattttgcctgcaaagacacgttttgtaggcaagctaccacaagaa
agactagagcttataaaagcaaataaagagtttataaaaagtaatcctgaaacttttgct
aattttgttgattatgtattggagtataagtattcagagattgaaaatatcgatgtggat
gctgctatttaccaaagtgattttatgactagtgctgatgagagaggttgtgataagttt
cataattctgctatttatcaaaaagctcaaatgcttagtcaattaccaggcaagctctat
gatagagcagtgcgtataattggtcgattagatttttcaaagctacctgaaaaagcacag
atggagtttcaagagtatctaaataagattgtgagtttagataatgatgagttgttagta
gatcatcgcggtaagactcgtaagacattagaagatatttatcaagaaatgcaagatgta
cgaagtaatcgtgatctaacagaagaacaacaagctttgttgtatgagttggaggagtat
cttttttag
DBGET
integrated database retrieval system
