Francisella sp. LA112445: FIP56_08325
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Entry
FIP56_08325 CDS
T08878
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
frl
Francisella sp. LA112445
Pathway
frl03030
DNA replication
frl03430
Mismatch repair
frl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
frl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIP56_08325 (dnaE)
03430 Mismatch repair
FIP56_08325 (dnaE)
03440 Homologous recombination
FIP56_08325 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
frl03032
]
FIP56_08325 (dnaE)
03400 DNA repair and recombination proteins [BR:
frl03400
]
FIP56_08325 (dnaE)
Enzymes [BR:
frl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIP56_08325 (dnaE)
DNA replication proteins [BR:
frl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIP56_08325 (dnaE)
DNA repair and recombination proteins [BR:
frl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIP56_08325 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QIW10707
LinkDB
All DBs
Position
complement(1721061..1724540)
Genome browser
AA seq
1159 aa
AA seq
DB search
MISHLRVHTGFSVVDSTVRLGDLFSRAKDKNIAAIALTDVCNLFAAVKFYKQALGSGVKP
IFGVELKIDTELGISDLILLAENNQGYQNIVDLVSKAYQEADRVGSIPLIPKNWLKESNL
ENVICLNGGQHGELGKAILAKNNVKAEEIIAENIAIFGQDNYIIEIHKIEYENEGLYNEK
ALELATKHNLIAVATNLTVFMESDDYDIHEIRACINEKTTILDESRKSRFTRQQYLKSAD
EMYDTFSSLSVLVDNTLAIAKRCNVTFELGKPCLPTVDIPDGLTEKEYFSKLCYQGLENR
LEKVLANKPQDKHDHITKVYKDRLQREIDIICDMGFPGYFLIVEDFIRWSKENDIPVGPG
RGSGAGSLVAYSLLITDIDPLPYGLLFERFLNPERVSMPDFDIDFCIQGRDRVIKYVEQK
YGKQSVGQIITYGTMAAKGVVRDVVRVMGQSFGFGDRIAKLIPETPGTTFKKILHEGEPL
YDEMQADEDVAEIVEKAQKLEGLPRSLGKHAAGIVISPTVISDFAPIYCEDKGGDIVTQF
DKGDVEDVGLVKFDFLGLKNLTIIKNAITSINAKRPNDQALLNISDIPLDDEKTFKLLQA
GNTTGIFQLESQGMRQIVKDLGTSNFEEIIALVALYRPGPMENIPTFIDRKHGRKRTTYL
HPLLEEVLRETYGIPVYQEQVMQMAQKLAGYTLGAADLLRRAMGKKKPEEMEQQRKIFKE
GAAKYHNIEAGLADEIFDQMEAFAGYGFNKSHAAAYALIAYQTAWLKAHYPDEYMAALMS
GDMGNTDQLVKFILDCKNMGIIVLSPNVNKSVYDCIAVSKGTILLGLGAIKGLGGEAIKS
ILTERDTEGEFSSIFDLTRRVDLRKVNKKALEALCFAGAIKDISRNRATAFNSIEKAIKN
AGYVNEMAAAGQNDLFGFTEQESDTDAELERECISEEWSLKELLINEKKALGMYFSGHII
DEESHWRNHVSFSDLQKIQQPNMDGNSVRIIASMITPAIRRKTKTGRILYIINIDDEFDR
ADCLVGEDVFALVKDNIKVDDIVVVEGKVSRDVQRECNKLSVDKVQPISQYIDENFSKVE
LNLRSKNVNPTNLKKVLDNLKTNIASSDSHKENILEITVSLDDVDGKFDYLQKPFSIYKF
VNDISRLIAEGSTVSLSGV
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcatcttagagtccatacgggattttctgttgttgatagtacagtacgttta
ggagatcttttctctcgtgcaaaagataaaaatattgctgcaatagcgcttacagatgtt
tgtaatttatttgctgcagtgaagttttataaacaagctttaggaagtggtgttaaacct
atatttggtgttgagctaaaaattgatactgaactaggtatttctgatctcatcctttta
gctgaaaataatcaaggctatcaaaatatagttgatttagtatcaaaagcttaccaagaa
gcagatagagtaggctcaataccacttataccaaaaaattggcttaaagagtctaactta
gagaatgtaatatgtctaaatggtggtcaacatggtgagcttggcaaggcaatcttagca
aaaaataatgttaaagctgaagagattattgctgaaaatatagccatatttggtcaagat
aattatattattgaaattcataagatagagtatgaaaacgaaggtttgtataatgaaaaa
gctcttgagttagcaactaagcataatctaattgcagttgcgacaaaccttacagtattt
atggagtcagatgattatgatattcatgagattagagcttgtatcaatgagaaaactaca
attcttgatgagtcacgtaaatcaagattcacgcgacaacagtatctaaaatcagctgat
gagatgtatgatacgtttagctctttatcagttttagttgataatacattagcgattgca
aaacgttgtaatgtgacatttgaactaggtaagccttgtctaccaactgtagatattcca
gatggtttaactgagaaagaatatttctcaaagctatgctatcaaggcttagaaaatcgt
ttagaaaaagtgttagcaaataagccgcaagataagcatgatcatattacaaaagtttat
aaagatagattacaaagagagattgatattatctgtgatatgggattcccaggctacttc
ttgatagtagaggatttcatcagatggtcaaaagaaaatgatatcccagtaggtccaggg
cgtggatctggtgctggttcattagtggcatattcattacttattacagatattgatcct
ttaccgtatggcctactttttgagagattccttaatccagaaagggtatcaatgccagat
tttgatattgatttttgtatccagggtcgagacagggttatcaagtatgtagagcagaaa
tatggtaaacaaagtgttggtcagattataacttacggtactatggcagctaaaggtgta
gtgcgagatgtagtgcgtgtaatgggtcaaagtttcggtttcggtgataggattgccaag
cttatccctgaaactcctggaactacatttaaaaaaattctccatgaaggcgaacctcta
tatgatgagatgcaagctgatgaagatgtcgctgaaattgttgagaaggctcaaaaacta
gaaggtctaccacgaagtttaggtaagcatgctgccggtatcgtgatatcaccaactgta
atatcggattttgctccgatatattgtgaggataagggcggtgacattgtaactcagttt
gataaaggtgatgttgaagatgttggtcttgttaagtttgacttcttgggactaaaaaac
ttaacgattatcaaaaatgctattacaagtattaacgctaagcgacctaatgatcaagct
cttttaaatatttcagatattcctttagatgatgaaaagacgtttaagctcttacaagct
ggtaatactacaggtatattccaattagaatcacaagggatgcgtcagattgtcaaggat
cttggtacctctaactttgaggagattattgccctagtagcactatatcgtcctggtcct
atggagaatataccaacatttattgatcgtaagcacggtcgcaaaagaactacatattta
cacccattattagaagaagtcttaagagagacttatggtattccagtttaccaagagcag
gtaatgcagatggcgcaaaagcttgctggctatactcttggggcagcagatttattacgt
cgagcaatgggtaagaaaaagccagaagaaatggagcaacagcgtaaaatctttaaagag
ggagctgcaaaatatcataatatagaggctggacttgctgatgagatatttgaccaaatg
gaagcctttgcaggttatggatttaacaaatcccatgctgcggcatatgctttaattgct
tatcaaactgcttggttaaaggcacattaccctgatgagtatatggctgctctaatgtca
ggggatatgggtaacactgatcagttagttaagtttatcctagattgtaaaaatatgggt
atcatagttttatcaccaaatgtgaataagagtgtttatgactgtatagctgtttcaaaa
ggtacaattttacttggtttgggagctattaaaggacttggtggcgaggctattaaaagt
atccttacagagcgagatactgaaggagagtttagttctatatttgatctgacgcgtaga
gtagatttacggaaggttaataaaaaagctcttgaagcactttgctttgcaggagctatt
aaggatatatctagaaatagagctacagcatttaactctatagaaaaagctattaaaaat
gctggctatgtaaatgaaatggcagcagctgggcaaaatgatctatttggttttacagag
caagagagcgatactgatgctgagttagaaagagaatgtatttcagaagaatggagcctt
aaagagttattaatcaatgagaagaaagccttaggaatgtatttctctgggcatattatt
gatgaagaaagtcattggcgtaatcatgttagctttagtgatctgcaaaagatccagcag
ccaaatatggatggtaattctgtgagaattattgctagtatgataactccagctatccgc
agaaaaaccaagactggtagaattctttatattattaatattgatgatgagtttgataga
gcagattgcttagttggtgaagatgtatttgctctagtaaaagataatattaaagttgat
gatattgttgtggttgagggtaaagttagtcgtgatgttcaacgagagtgtaataaatta
agtgttgataaggttcaaccgatatcacaatatattgatgagaactttagtaaagttgag
ctaaatcttagaagtaaaaatgtaaatcctacaaatcttaaaaaggttttagataatcta
aaaacaaatatagcatcttcagatagccataaagagaatattctagaaataactgtttct
ctagatgatgtggatggaaagtttgattatttacaaaagcctttttctatttataagttt
gttaatgatattagtagattaatagctgagggaagtacggttagtttgagtggggtttga
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