Francisella sp. LA112445: FIP56_09090
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Entry
FIP56_09090 CDS
T08878
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
frl
Francisella sp. LA112445
Pathway
frl03420
Nucleotide excision repair
frl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
frl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FIP56_09090 (uvrD)
03430 Mismatch repair
FIP56_09090 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frl03400
]
FIP56_09090 (uvrD)
Enzymes [BR:
frl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIP56_09090 (uvrD)
DNA repair and recombination proteins [BR:
frl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIP56_09090 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FIP56_09090 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
DUF4252
Motif
Other DBs
NCBI-ProteinID:
QIW10839
LinkDB
All DBs
Position
complement(1880022..1882247)
Genome browser
AA seq
741 aa
AA seq
DB search
MSNKFLSGLNPQQQKATLLEDRNSLILAGAGSGKTKVLTSRIAYLCQNKSVAIDNILAVT
FTNKAAREIQQRVESMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQAQ
LIKRVIKDLGLDDKKYPPKLLQNFINKQKDKAIRSNKLANQYEVNYSHIYKAYEERLLLD
NALDFADLLLYLYELFSLNQQLREYYQSLFKYILIDEFQDTNQVQYMWLKLLATNSNYTM
AVGDDDQSIYGWRGAVVDNIHNYVKDINNVEVIKLEQNYRSTKNILKAANSVIKNNDNRM
SKELWSAAEEGEKVEVYCAVNERDEAKYIIEKVRNLHSQGVDYSDVAILYRSNYLSRVLE
ESFIYASIPYRIYGGFKFFDRAEIKDALAYLRLAVTNSDNLAFERIINTPTRGIGNKTLE
TIRNFSQINSISYWQATLEVIQRELVTKRTAGLLFKFIELINKISSQISELSLDKLLEYV
INKSGLLASYEEKNTEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFAVLEA
GDMQADETVDSVQLMTIHASKGLEFKYVFMVAAEEGVFPPSSIINAEEAFDSTHSKKMRE
KLAEERRLFYVAITRAMKALTISYAQVRNIFGRSSFQVKSRFLTEIDDEHLSEGKSHSID
KPKPKVRQKSNFGVSAFDFLKSNNSKGDSFNPGDRVYHKVFGKGVFVKSQTQGSKEFFTV
DFGSDVGQKILLADIANLVKV
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaatttttatcaggattaaatcctcaacaacaaaaagcaaccttgctagaa
gaccgtaattctttaatactagcaggtgctggtagtggtaaaacaaaagttctcacatct
cgaatagcttatctttgtcaaaataaaagtgtagctatagataatatcctagctgtaaca
tttactaataaggctgctagagagatacagcaacgtgttgaaagtatgctaggtatatcg
acatttggtatgtggataggaacttttcatggtattgcacatagactattacgtaaacat
gctcatgagcttggactagataagaattttagaatcttagatcaagatgaacaagcacag
cttataaaaagagttataaaagatttaggcttagatgataagaaatatcctcctaagcta
ttacagaattttataaataagcaaaaagataaggctatacgtagtaataaacttgctaat
caatatgaagtgaactatagccatatctataaggcttatgaagaacgtttactattagat
aatgctttagattttgcagatcttcttttgtatttatacgagcttttttcattaaatcaa
caattaagagaatattaccaaagtttatttaaatatatccttattgatgagtttcaagat
acaaaccaagtgcaatatatgtggctaaaacttttagctacaaatagcaactatactatg
gctgttggtgatgatgaccaatcaatatacggttggcgtggagcagttgttgataatatt
cataattatgtcaaagatatcaataatgttgaggttataaagctcgagcaaaattatcgc
tcaaccaaaaatattctaaaagcagcaaattctgtaattaagaataatgataacaggatg
tcaaaagagctttggtcagcagccgaagagggtgaaaaggtagaggtttattgcgcagta
aatgagcgtgatgaagctaagtatattattgagaaagttcgtaatctacattcgcaaggt
gtcgattatagtgatgttgcaatactctatcgttctaactatttatcgcgtgttttagag
gagagttttatatatgcaagtattccttatagaatttatggtggtttcaaattctttgat
cgagctgaaattaaagatgcgttggcatacctaagattagctgtaacaaatagtgataat
ttagcttttgaaaggattattaatactccaactagaggtattggtaataaaactctagaa
actattagaaatttttctcaaataaactcaatttcatattggcaggctacacttgaggta
attcaaagagagcttgtgactaaaagaacagcaggactattatttaaattcatagaattg
attaataagatatctagtcagattagtgagctaagtttggataagttacttgagtatgtg
attaataaaagtggtttattagcttcttatgaagagaaaaatacagaaaaagatcgtcaa
aaaatagataacttaaaagagcttataagtgcagcaaaagactttgaacctcagatagaa
ctacttgatgataatacagatattttacaagacttcttatcattcgctgtactagaagct
ggagatatgcaagctgatgagactgtagatagtgttcaactgatgactatccatgcttca
aaagggttagagtttaaatatgtatttatggtagctgctgaagagggtgttttccctcca
agctcaatcattaatgcagaagaagcttttgatagtacgcattctaaaaaaatgcgggag
aaactggcagaagaaagaagattgttttatgtagcaataacaagagctatgaaagctttg
actattagttatgctcaagtacgtaacatatttggtcgtagtagttttcaggttaaatct
aggtttttaactgagatagatgacgagcatctaagtgaaggtaagagtcatagtatagat
aagccaaaacctaaggtgcgacaaaaatctaactttggtgtctcggcgtttgattttctt
aagtcaaataattctaaaggagatagctttaatcctggtgatagagtttatcataaagtt
tttggtaaaggtgtatttgttaaatctcaaactcaaggttcaaaagagttttttacagtt
gattttggcagtgatgttggccaaaaaattcttttagcagatattgctaatctagtaaaa
gtttag
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