Francisella sp. MA067296: BBG19_0569
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Entry
BBG19_0569 CDS
T05204
Name
(GenBank) Ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
frm
Francisella sp. MA067296
Pathway
frm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
frm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBG19_0569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
frm03019
]
BBG19_0569
03009 Ribosome biogenesis [BR:
frm03009
]
BBG19_0569
Enzymes [BR:
frm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BBG19_0569
Messenger RNA biogenesis [BR:
frm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BBG19_0569
Ribosome biogenesis [BR:
frm03009
]
Prokaryotic type
rRNA processing factors
BBG19_0569
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Antiterm
Anti-TRAP
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
APC91305
LinkDB
All DBs
Position
complement(593798..596464)
Genome browser
AA seq
888 aa
AA seq
DB search
MKRILINSKNGEETRIATLDNGKLIDLDIESFDREQKKANIYKGYISRIEPSLNAIFVNY
GEEKNGFLPFKEVSEYYLKDVPDGDNIAPLLSEGQELIVQIDKEERGDKGAALTTFITLA
GSYMVLLPNNPDGGGISRRVEGEDRERLKKYLKELNIPKNMSVIARTACVECSFEELKHD
FDTLVELWESISQAYHRIKKPALLHKESDIIVRTIRDHLKEDVKEIIVDSKECFEDVKRQ
LNLLRQSFDVNKVKLYNEELPLFAQFGIDQQIENAYKREIRLPSGGSIIIDTAEALVAID
VNSSRATKAEDVETTAFKTNLEAAEEVARQLRIRDLGGLVIVDFIDMSFYPNRKQVEEKL
MEALQQDRARIQMSRISKLGLVEISRQRLSSSINESVMQKCPRCEGHGFIKTTQATALTI
LRKIRAEAIKEDTNEIRVQVPVDIAAYILNEKRDSIVEIERISQVKVMIIPNFNMESPKF
QMQRIWGTSYKSNRTSSELIEDVYNVEIPKAGKKKVAAVDLNKAIENQTTSDTQEQKPQT
NNQVNTAMQNDKKQAAITQHPKKKGFFAKLISIMFASESSAAEIELNKQTQKQQNKGQKF
QKQQQNKPQKDNDQRNERNNNDNKNERNKNRINKGAKPQKPQENKPQKDSNQRNDNNGNN
AFNNINGNDKNERNKNKSNNDKFDKKSNNRNSRSNNLNLNNAEEVVDIMQLKYQNQTAVA
KTDNVKKVISKNPEEFISVMVKDVLENYDSLKDDGATKVATQEKIKTNKYLKFDTVSVDT
QIALLDETAKLNETVEAEQTSPVTEESLSIDKIDDVTIQQAVAEQEKPIKVAKETKQASE
TKPKKEKQTAVKNNKKEKTIDKEANQIQARPEYINYSPAIDFEAQALI
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatactaataaacagtaaaaatggcgaagaaacaaggattgccaccttagat
aacggcaaactaatagatttagatatcgaaagttttgatagagaacaaaaaaaagcaaat
atctataaaggctatatttcaaggattgaaccaagtttaaatgccatctttgttaactat
ggtgaagaaaaaaatggttttttaccatttaaagaagtttcagaatattatctaaaagat
gttccagatggcgataatattgcacccttactttcagaaggacaagagctgatcgtacaa
atagataaagaagagcgtggcgataaaggtgccgcgttaactacatttattaccctggct
ggctcttatatggtattactaccaaataatcctgatggcggcggtatttctcgtcgtgta
gaaggtgaagatagagaaagattaaaaaaatatctcaaagaattgaatatccccaaaaat
atgagtgtaattgcaaggacagcttgtgttgaatgctcttttgaagaattaaaacatgat
tttgatactttagttgagttatgggagtctatttctcaagcttatcatagaatcaaaaaa
ccagcactattacataaagagagtgacattattgttagaacaataagagatcatttaaaa
gaagacgtcaaagaaattatcgttgattctaaagagtgcttcgaagatgtcaaaaggcaa
ttaaacttgctaagacaaagttttgatgtaaacaaagtcaaactatacaacgaagagtta
ccattatttgcccaatttggaattgatcagcaaatagaaaatgcctacaaaagagaaatt
cgcttaccatctggcggttctataataatagataccgcagaggcacttgtggcaatagat
gtaaactcatctcgtgctaccaaagctgaagatgtagaaactacagcatttaaaaccaac
ttagaggctgcagaagaggtagctcgtcagcttagaatcagagacttaggtggtcttgta
atagttgattttatcgatatgtctttctatccaaataggaaacaagtcgaagaaaagcta
atggaagcgctacagcaagatagagcgcgtattcaaatgtcacgcatttctaaacttgga
cttgttgagatatcaagacaacgcttaagttcttcaattaatgaaagcgtaatgcagaaa
tgcccacgttgtgaggggcatggttttatcaaaactactcaagctacggctcttaccatc
ctgcgtaaaattagagcagaagctatcaaagaagatactaacgagattcgtgttcaagtt
cccgtagatatcgctgcgtatatactaaatgagaaaagagacagtatcgttgagattgag
agaatttctcaagttaaggttatgattatccctaactttaatatggagtcaccaaagttt
caaatgcagagaatctggggcactagctataaatcaaatcgtactagctcagagttaata
gaagatgtttataacgttgaaattcctaaggctggtaagaaaaaagttgctgctgtagat
ttaaacaaggctatagaaaatcaaactactagcgatactcaagagcaaaagccacaaact
aacaaccaagtaaatacagctatgcaaaatgataaaaaacaagctgctataactcaacac
cctaagaaaaaaggcttttttgctaagctaattagtatcatgtttgcaagtgaatctagc
gctgctgaaatagagcttaataagcaaacccaaaaacaacaaaacaaaggacaaaaattt
caaaagcagcaacagaataagccgcaaaaagataatgatcaacgcaatgagcgtaacaat
aatgataacaaaaacgagcgtaacaaaaatagaatcaataaaggggcaaaacctcaaaaa
ccacaagaaaacaagccgcaaaaagatagtaaccagcgtaatgataataacggtaataat
gcctttaacaatattaatggtaatgataaaaacgaacgtaataaaaataagtcaaacaat
gataaatttgataaaaaatcaaataaccgcaatagcagaagtaataatctaaatctaaat
aatgctgaagaagttgttgatattatgcaacttaagtatcaaaatcaaacagctgttgca
aagactgataatgtaaaaaaagtgatttctaagaatcctgaggagttcatctctgtaatg
gttaaagatgtcttagaaaactatgatagtctaaaagatgatggtgctacaaaggtagct
actcaagagaaaattaaaacaaacaaatacttaaaatttgatactgtatctgtagatacg
caaatagctctacttgatgaaacagctaaattaaatgaaactgttgaagctgagcaaact
tcacctgtaacagaagaatctttaagtattgataaaattgatgatgtaacaatacaacaa
gctgtagcagagcaggaaaagccgataaaagtagcaaaagaaactaaacaagctagtgaa
actaagcctaaaaaagaaaagcaaactgctgtaaaaaataataaaaaagaaaaaacaata
gataaagaagctaatcaaattcaagctagacctgagtatataaactactcgcccgcaatt
gattttgaagctcaagcactaatatag
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