Francisella sp. MA067296: BBG19_0648
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Entry
BBG19_0648 CDS
T05204
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
frm
Francisella sp. MA067296
Pathway
frm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
frm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BBG19_0648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frm03400
]
BBG19_0648
DNA repair and recombination proteins [BR:
frm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BBG19_0648
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BBG19_0648
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Kinesin
SWI2_SNF2
Microtub_bd
AAA_22
DUF87
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
APC91384
LinkDB
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Position
671531..673543
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AA seq
670 aa
AA seq
DB search
MSENKFNLVTRYAPAGDQPKAIESLVTGVNNGLQHQVLLGVTGSGKTYTMANVIQQTQKP
CLILAHNKTLAAQLYSEFKQYFPDNAVEYFVSYYDYYQPEAYVAASDTYIEKDSSVNEHI
EQMRLSATKAILERNDVIIVATVSAIYGLGDPEQYMQMLLHLKVGEDLGLKKAQAKLVEM
QYSRNDMDFSRGIFRVRGEVLDIFPADSEKDAIRVEFFDDEIEAISVIDSLTSRKVKSLH
RATIFPSTHYVASKERKEIVIEEIKKELKERVKYFEEEGKLLEAQRIEQRTKYDIEMIQE
LGYCTGIENYSRLLSGRASGDPPPTLIDYLPENALVIVDESHVTLPQFGGMYKGDLSRKA
NLVNYGFRLPSALDNRPLKFAEFEKLLPQAIYVSATPANYELEKSQNTVEQVIRPTGLLD
PEVFVRPVTIQVEDALSEINNAIAKDERVLITTLTKKMAENLTEYLSEHGANVRYLHSDI
DTVERVQIIHDLRHGVFDVLVGINLLREGLDMPEVGVLLIFDADKEGFLRSEKSLIQTIG
RVARNQNGRAILYADVVTKSMQKAIDETLRRRKLQDEYNQKHNITPKTIIKNIDNMLDSS
PEMQKRAYKNNLRLKVDDVDVSAILSMTEASKVIKALEKRMRAYAKELEFEKATTIRDKI
AEIKQRFINL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaataaatttaatctagtaacaagatatgctccagcaggtgaccagcctaaa
gcaatagaatctttggtgacaggtgtgaataatggcttacaacatcaagttttacttggg
gtaacaggatctggtaaaacttataccatggcaaatgttatccaacaaacacaaaagcca
tgcttgatacttgcacataataaaaccttagcagcacagctatattctgaatttaagcag
tattttcctgataatgccgttgagtattttgtctcatactatgactactatcagccagaa
gcttatgtagcagcatcggatacttatatagaaaaagattcatcagtaaatgagcatatt
gagcagatgcgtttgtctgcaaccaaagcgatacttgagcgcaatgatgtgataattgta
gcaacagtttcagcaatttatggtctaggtgaccctgagcaatatatgcaaatgctgtta
catctcaaagttggtgaagatttaggacttaagaaagcacaagccaaacttgttgaaatg
caatattcgcgtaatgatatggattttagtcgcggaatttttcgagtgcgcggagaggtt
ttagatatcttcccagcagactctgagaaagatgctattcgggtagagttttttgatgat
gagatagaagcaataagcgtaattgattcgctaacttctaggaaggttaaatcacttcat
agagctacaatttttccaagcactcactatgtcgcttcaaaagagcgtaaagaaatagta
atagaagagattaaaaaagagctcaaagaaagagttaagtattttgaagaagagggaaaa
cttcttgaagcacaaaggatcgagcaacgcacaaaatatgatattgagatgattcaggaa
cttggatattgtacaggaatagagaattattcaagattgctttctggaagagcttcaggt
gatccgccacctactttgattgattacctcccagagaatgctttagtgatagttgatgaa
tcacatgtaacactgcctcagtttggtgggatgtataagggggatctctcgcgtaaggct
aatcttgtaaactatggttttaggctcccatcagcgttggataatcggccattaaaattt
gctgagtttgagaaactgctaccgcaggcgatttatgtatcagcaacgccagcaaattat
gaattagaaaaatctcaaaatacagttgagcaagtgattcgtccaacaggattgttagat
cctgaggtttttgtccgtccagtgacgatacaagttgaagacgctttgtctgagattaat
aatgctattgctaaagatgagagagtactaataactacactcactaaaaaaatggcagaa
aatctcaccgagtatttgtctgaacatggggctaatgttagatatctgcattcagatatt
gatactgtcgaaagagtacagataattcatgaccttcgtcatggtgtgtttgatgtgctt
gttgggattaaccttcttagagaaggccttgatatgccagaagttggcgtgttgttaata
tttgatgctgataaagaaggcttcttgcgttcagagaagtcgcttattcagactatcggg
cgtgtggcaagaaaccaaaatggccgtgctattttatatgcagatgttgtcacaaagtca
atgcagaaggcaatcgatgagacattgcgccgacgtaaactccaagatgaatataaccaa
aagcataatataaccccaaaaactattatcaagaatattgataatatgcttgatagttca
ccagagatgcaaaaacgcgcttataaaaataatttgcgcttaaaggttgatgatgtcgat
gtttcggctatactaagtatgactgaagcttcgaaggtcatcaaagctctcgaaaagcgt
atgcgagcttatgcaaaagagcttgaatttgaaaaagctacaactattagagacaagata
gctgaaataaagcagaggtttattaacttgtaa
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