Francisella sp. MA067296: BBG19_0779
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Entry
BBG19_0779 CDS
T05204
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
frm
Francisella sp. MA067296
Brite
KEGG Orthology (KO) [BR:
frm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BBG19_0779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
frm03021
]
BBG19_0779
Transcription machinery [BR:
frm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BBG19_0779
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_ner
Sigma70_r1_1
Sigma70_r1_2
PspA_IM30
Motif
Other DBs
NCBI-ProteinID:
APC91515
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Position
796197..797930
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AA seq
577 aa
AA seq
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MTKEDLLSDLKDLIVDGKERGYLTRADILDALPGDVSEDPKIYEEIEAILIDAGIDVYDR
TPQLEEDDERKVSEANLDDLKGKTSDPIRMYMREMGIVDLLDKKGETDIAIRIEEGTTEV
FSTILSYPIVIKTYIERFRELEEKAIDYMSSQDIEDEPVARYIRFNEIMAGFSDEHITEE
KVAEDDHEEKIDTQRAYEFFTNLEKMFEEYQDKPNKKLYSKIVKEFDNLRLSTSHLQKLV
DYIRLPYARVKEFERKILRLCVERSKTPRQEFIKVYKVGSVEWLERLTKKYKFTENTIRE
INNLTKQINQFQNLMMMDIEELKQVNLEIARSEAKITQAKKEMIEANLRLVVSEAKKYTN
RGLHFLDIIQEGNIGLMKAVDKFDYRKGFKFSTYATWWIRQAITRSIADQARTIRVPVHM
IETINKVNRIKRQILQEKGREATEEEIIEHTPNMTKEKLKKILNISHTPISMESPIGDDE
DSTVGDFIEDKNNYSPIEAANLENLREAIKELIENGLSERESKVLMMRFGIGMNTDHTLE
EVGKQFTVTRERIRQIEAKALRKLKHPSRSAFLKSFL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagaagatttactctctgacctaaaagacttaatagttgatggtaaggaaaga
ggatatttaactagagccgatattttagatgctctaccaggagatgtttcagaggatcct
aaaatatatgaagaaattgaggctatacttattgacgcgggtattgatgtctatgataga
actcctcagctagaagaagatgatgaaagaaaggttagtgaagctaatcttgatgatcta
aaaggtaaaacttcagatcctattcgtatgtatatgcgtgaaatgggtattgttgatctt
ttagataaaaaaggtgagactgatattgctattaggattgaagaaggtactacagaagtt
tttagtacgattttaagttatccgatagtaattaaaacttatattgagcgtttccgtgag
ctagaagaaaaagctatagactatatgagttctcaagatattgaagatgagcctgtggct
agatatattcgctttaatgagattatggctggttttagtgatgaacatataactgaagaa
aaagttgctgaagatgatcatgaggaaaaaattgatactcaaagagcttatgagtttttt
acaaacttagagaaaatgtttgaagaatatcaagacaagcctaataaaaaactttatagt
aaaatagttaaggaatttgataatttaaggttatcaacatcacatttacaaaagctagtt
gactatattaggcttccttatgctcgagttaaagagttcgaaagaaaaattttaagacta
tgtgttgagagatcaaaaacaccacgccaagagtttattaaggtttataaagttggttct
gtagaatggttagagcgattaactaaaaagtataaatttactgagaacactatcagagaa
ataaataaccttactaagcaaattaatcaattccaaaatttaatgatgatggatatcgaa
gagcttaaacaggtaaatcttgagattgcaagaagtgaagctaagattactcaggctaaa
aaagaaatgatagaagcaaacttaaggttagttgtttctgaagctaaaaagtatactaat
agaggcttacatttcttagatattatccaagagggaaatattggcttaatgaaagctgta
gataagtttgattatcgcaaagggtttaagttctcgacatatgctacttggtggatacgt
caggcaattactcgttcgattgcagatcaagctagaactattcgtgtaccagtacatatg
attgagacaattaataaggtaaatagaattaaacgccagattctacaggaaaagggtcgt
gaagctacagaagaggagattattgaacatactcctaatatgactaaagagaaacttaaa
aagattctcaatatttcacatactccaatttcaatggagagcccaattggtgatgatgaa
gattctacagtaggtgattttattgaggataaaaataactattctccaatagaggcagct
aacctagaaaatttacgagaagcaataaaagagctaattgaaaatggattaagtgagaga
gaatccaaagttctgatgatgcgttttggcataggtatgaataccgatcatactttagag
gaagttggtaagcagtttactgttactagagagcgtattaggcaaattgaggctaaggcg
cttagaaaacttaagcatccttctagatcagcttttttgaaatcattcttgtag
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