Francisella sp. MA067296: BBG19_0854
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Entry
BBG19_0854 CDS
T05204
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
frm
Francisella sp. MA067296
Pathway
frm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
frm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BBG19_0854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
frm03019
]
BBG19_0854
Enzymes [BR:
frm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BBG19_0854
Messenger RNA biogenesis [BR:
frm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BBG19_0854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
P-loop_SecA
HI1480
NAT10_TcmA_helicase
HypF_C_2
Motif
Other DBs
NCBI-ProteinID:
APC91590
LinkDB
All DBs
Position
879300..880682
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AA seq
460 aa
AA seq
DB search
MPVISVNIARFINTGNKIFMQFSDLGLNPSICSALVKKGYTSPTAIQTKAIPTILQGSDV
MASAQTGTGKTAAFTLPIIQNLLDQPKAQANKIKVLVLTPTRELAAQIQEQVSLYAENTH
IRYTVVFGGVSINPQMMKLRKGVEILIATPGRLLDLYSQNAIRFDSLNTLVLDEADKMLD
MGFINDLKKIHNLLPKKIQTLMFSATFSPEIKNLANEFLNDPQFISVDAVNTAVKKIIQK
IYTLDKSNKINALIALIRQQNLHQVLVFSRTKNGANKISEKLNNAGISSSAIHGNKSQTA
RTKALADFKAKQINVLVATDIAARGIDIVQLPCVINLDLPNVAEDYVHRIGRTARAGQDG
LAISLVSADEVTSLSNIEHLIGHLLPREELEGFEVQHNVPITSMTRKTKANKIDEVKIIA
AKRANKANNKKPANHNKDFAKKIRVKIQANKSVRKPKAKD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgccagttattagtgttaatatagctaggtttataaatacaggaaacaaaatattcatg
caattttcagatttaggtttaaatccttcaatatgtagtgctttagttaaaaaaggttac
acaagcccaacagcaatccaaacaaaagctatacctactattttgcagggtagtgatgtt
atggcatcagcgcaaacagggacgggaaaaaccgcagcttttacgctaccaattattcaa
aatcttttagatcagccaaaagcacaagcaaataaaattaaagttttagttttaactcca
acaagagagttggctgcgcaaatccaagagcaagtcagtttatatgctgaaaatacgcat
attcgttatacagtagtatttggcggtgtaagtatcaatcctcaaatgatgaagttacgt
aaaggtgtggaaatattaatagccactccaggtagattacttgatttatatagtcaaaat
gcaattaggtttgatagcttaaatactttagttcttgatgaagcagataaaatgctagat
atgggttttattaatgatttaaaaaagattcataatcttttacctaaaaaaatccaaaca
ctaatgttttcggcaacattttcaccagagataaaaaatttagctaatgaatttcttaat
gatccgcaatttatctcggtagatgctgtaaatactgctgtgaaaaaaataatccaaaaa
atctatactttagataaatctaacaaaataaatgctttgattgcgctgattaggcaacaa
aacttgcatcaagtactagttttctcgcgtactaaaaatggcgcaaataaaatttcagaa
aagttaaataatgctggtattagcagtagtgctattcatggtaacaaaagccaaactgcg
cgtaccaaagccttagcagattttaaagctaaacaaataaatgtcctagttgctacagat
atagcagctcgtggaattgatattgttcaactaccatgcgtgataaatcttgacttacca
aatgtcgctgaagattatgtccatagaataggtaggacagctagagcaggacaagatggt
ttagcaatttctctagttagtgctgatgaggtaacatcattatcaaatatcgaacatcta
ataggacatttgttacctcgtgaagagcttgaaggctttgaagttcaacataatgtacct
ataactagcatgactcgaaaaaccaaagctaataaaatagatgaagtaaaaattattgca
gctaaaagagcaaataaagctaataataaaaagcctgctaatcataataaagattttgct
aaaaaaattagagtaaaaattcaagcgaataaaagtgttagaaaaccaaaagctaaagat
taa
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