Francisella sp. MA067296: BBG19_1227
Help
Entry
BBG19_1227 CDS
T05204
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
frm
Francisella sp. MA067296
Pathway
frm03410
Base excision repair
frm03430
Mismatch repair
frm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
frm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBG19_1227
03430 Mismatch repair
BBG19_1227
03440 Homologous recombination
BBG19_1227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frm03400
]
BBG19_1227
DNA repair and recombination proteins [BR:
frm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BBG19_1227
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BBG19_1227
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BBG19_1227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
DHH
Glu_synthase
Motif
Other DBs
NCBI-ProteinID:
APC91959
LinkDB
All DBs
Position
1253239..1254981
Genome browser
AA seq
580 aa
AA seq
DB search
MLIKQKKIDHNIFSNLLAKGYDSFTAKIISARVTQIDNINLVLNGSIKDLSSPFLFKDIK
KAVERLYQALQNNEVIGLETDHDCDGQTSHAILYEALVKIFGYPNEKIRSYIGHRLQEGY
GLSESLMNRILTDKIRPSLIITADNGSTDEPRIAILKQNGIDTIVTDHHAIPPEGAPKSA
IAVLNPSQQGCNYPDKAIAGCMVAWLFMAALRRKYLQNNKAISQTYGLSNLLDFVAIGTV
ADCVSMATSHNNRIVTKIGIEQLKNNQRLCWEFLDKDKLSSEYIGFNIAPILNSDGRVSD
ALGSVSFLLEEDKHNIEVIFNNLKQQNNQRKEIQKKLTQEAIAQAHQLNQQKNSLCILLE
DGHSGIHGISASRIKEMFGKPVIIFSQTQNDSTVISGSARSLDNIHIKSILDNIAVKEPQ
LMIKYGGHKGAAGLTIKKCDFDKFYQLFEIEITDITAKQNIVLEPSIEYDFELEESDFEL
ETLDKIDALEPFGREFEKPLFCNQFMIENLRLVGKDRNHAQLVLRYKDLSSIKAIWFNAA
DNKTLKQITIGDSIKACYELQKEEFLGQVNLSLNIKTIEK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgctaattaaacaaaaaaaaattgatcacaatatctttagcaacctactagctaaaggc
tatgactcttttacagcaaaaataatctcagctagagtaacccaaatagataatattaat
ctagtattaaatggttcaatcaaagatctatcatcaccctttttatttaaagatatcaaa
aaagctgtagaacgtctttatcaagcactacaaaataatgaagttataggtctagaaact
gatcatgattgcgatggtcaaacttcacacgcgattttatatgaggctttggtaaaaata
tttggctaccctaacgaaaagattcgctcatacattggtcatagattacaggaaggttat
ggtttatcagaatcgctaatgaatagaattcttacagataagataagaccaagtttaatt
ataacagcagataatggttctacagatgaaccacgaattgctatcctcaaacaaaatggc
atagatacaattgtaactgatcatcatgctatacctccagaaggtgctcctaaaagtgct
atagctgtgcttaatccgtctcaacaaggctgtaactaccctgataaagctatcgctggt
tgtatggttgcttggctttttatggctgcactacgtaggaagtaccttcaaaataacaaa
gcaatatctcaaacatatggtttaagtaatttattagattttgtcgctattggtacagtt
gctgattgtgtaagtatggcaactagtcataacaatcgcattgtaacaaaaattggtatc
gaacaattaaaaaataaccaacgcttatgttgggaatttctagataaagataaattatca
agtgaatatatcggttttaatatcgcaccaattctaaatagtgacggtagagtttctgat
gctttaggatctgttagctttttactcgaggaagataagcacaacatagaggttatcttt
aataatcttaaacaacaaaacaaccagcgcaaagaaatccaaaaaaaacttactcaagaa
gctatagctcaagcccaccaattaaatcagcaaaaaaattctttatgtattcttctagaa
gatggtcattctggaattcatggtatatcagcaagtagaatcaaagaaatgtttggtaag
ccagtaattatcttctcgcaaacacaaaatgattcaactgtaatatctggatcagcacga
agcctagataatattcatatcaaaagtatcttagataacatagctgttaaagagccacaa
ctaatgattaaatacggtggtcataaaggtgctgcaggcttaacaattaaaaaatgtgat
tttgacaaattctatcaattatttgaaatcgaaatcactgacatcactgctaaacagaat
atagttcttgaacctagtatagaatatgattttgagcttgaagagagtgattttgaatta
gaaactttagataaaatagatgctttagaaccttttggtagagaatttgaaaaaccttta
ttttgtaatcaatttatgattgagaatttacgcttagttggtaaagatagaaatcatgct
cagctagtattacgctataaagatctatcatcaatcaaagcaatatggtttaatgctgct
gataataaaactctaaagcaaataactattggtgattctataaaagcctgctatgagcta
caaaaagaagaattcttaggtcaagtaaatttatcacttaatattaaaaccatcgaaaaa
tga
DBGET
integrated database retrieval system
