Frigoribacterium sp. NBH87: F1C15_01080
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Entry
F1C15_01080 CDS
T06748
Symbol
rhaS
Name
(GenBank) rhamnose ABC transporter substrate-binding protein
KO
K10559
rhamnose transport system substrate-binding protein
Organism
frn
Frigoribacterium sp. NBH87
Pathway
frn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
frn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
F1C15_01080 (rhaS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
frn02000
]
F1C15_01080 (rhaS)
Transporters [BR:
frn02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
F1C15_01080 (rhaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Serglycin
Motif
Other DBs
NCBI-ProteinID:
QNE42610
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All DBs
Position
220581..221645
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AA seq
354 aa
AA seq
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MEFPTFPRGRALRRGLAAAATVAAVSLVASGCALTAGDDAGSGSGSGGGSSSIAFVPKQL
NNPYTDVVLGGGEAASKDIGYDYSVVGPLEASASSQVTFLNTLTQQGTNVIVIAANDPDA
VGPALKEARDGGAKIVAFDSDTNPDYRDVFVSQVEAKDVALIQIRQMSEQIGGEGDIAIL
SATANATNQNEWIKYIQEEVETNPDYAGISIVSTVYGDDDDAKSFQEAQGLLQANPDLKG
IISPTTVGIAATARYLSTSEYKGKVALTGLGLPNEMREFVKDGTVTAFALWDPAQLGEVA
AYAGQALVDGTITGAEGDTFTAGDLGERTVGADGIIIVGPPTEFDADNIDDYDF
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggagttccccaccttcccccgcggccgcgccctccggcgaggcctcgccgccgccgcg
accgtcgccgccgtctcgctcgtcgcctccggctgcgccctgacggccggcgacgacgcc
ggctcgggctccggctcgggcggcggctcgtcgtcgatcgccttcgtgccgaagcagctc
aacaacccgtacaccgacgtcgtcctcggcggcggcgaggccgcgtcgaaggacatcggc
tacgactacagcgtcgtcggcccgctcgaggcgagcgcgtcgtcacaggtcaccttcctc
aacaccctcacccagcagggcacgaacgtcatcgtcatcgccgcgaacgaccccgacgcg
gtcgggcccgccctgaaggaggcgcgcgacggcggagcgaagatcgtcgcgttcgactcc
gacacgaaccccgactaccgcgacgtgttcgtcagccaggtcgaggcgaaggacgtcgcg
ctcatccagatccgccagatgagcgagcagatcggcggggagggcgacatcgccatcctg
tcggccacggcgaacgccacgaaccagaacgagtggatcaagtacatccaggaggaggtc
gagacgaacccggactacgcgggcatctcgatcgtctccaccgtctacggcgacgacgac
gacgcgaagtcgttccaggaggcccagggcctgctgcaggcgaaccccgacctcaagggc
atcatctcgcccaccacggtcggcatcgcggccaccgcccgctacctctcgacctcggag
tacaagggcaaggtcgcgctcaccgggctcggcctgcccaacgagatgcgcgagttcgtc
aaggacggcaccgtgacggccttcgccctctgggacccggcgcagctgggcgaggttgcg
gcctacgcgggccaggcgctggtcgacggcaccatcaccggcgccgagggcgacacgttc
accgccggcgacctcggtgagcgcaccgtcggcgccgacgggatcatcatcgtcggcccg
ccgaccgagttcgacgccgacaacatcgacgactacgacttctag
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