Frigoribacterium sp. NBH87: F1C15_03755
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Entry
F1C15_03755 CDS
T06748
Name
(GenBank) DNA photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
frn
Frigoribacterium sp. NBH87
Brite
KEGG Orthology (KO) [BR:
frn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frn03400
]
F1C15_03755
Enzymes [BR:
frn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
F1C15_03755
DNA repair and recombination proteins [BR:
frn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
F1C15_03755
Prokaryotic type
F1C15_03755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
BLH_phosphatase
Motif
Other DBs
NCBI-ProteinID:
QNE43044
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All DBs
Position
complement(813872..815149)
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AA seq
425 aa
AA seq
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MPVTVRRVGRAVPPPRRRPPRGAHDGPVPTPTRAAGLDALEDFVPRAGAAYARDRNHDDG
PSRSNVSGLSPYLRHRLVTEQEVVEAVLAHTSLGAAEKFVQEVFWRTYWKGWLEQNPEVW
RRYRHDVAELTAGDLPPGHSDAVEGRSGIEAMDAWVRELIDTGYLHNHTRMWFASIWVFT
LGLPWQLGADFFHRHLLDGDAASNTLSWRWVAGLQTRGKTYLATASNISRFTDGRFSPAG
LATTARALDEEALPARTPVDPDDVVGRVGDRVGLLLHEEDLEAGSLLAERPDLVHTLLAT
AVSADAGARSPSGVSPVVAAFTAGAVADAAARTLDASARPARVLADAAPATVLSWARAEG
LDTVVVPFAPVGPVAERLEALRPVLDAEGIALVTVRRRWDGTAWPHAARGFFPFRERIPA
LVRQL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgaccgtacgccgcgtcggccgcgctgtcccgccgccccggcgtcgtccaccc
cgtggggcgcatgatgggccggtgcccacccccaccagagccgccggcctcgacgcgctg
gaggacttcgtcccccgcgccggcgccgcctacgcccgagaccgcaaccacgacgacggg
ccctcccgcagcaacgtctcggggctgtcgccgtacctgcgccaccgcctcgtgaccgag
caggaggtcgtggaggccgtcctggcccacaccagcctcggggccgccgagaagttcgtc
caggaggtgttctggcgcacgtactggaaggggtggctggagcagaaccccgaggtctgg
cggcggtaccgtcacgacgtcgccgagctcacggcgggtgacctccccccgggccacagc
gacgccgtcgaggggcggtcgggcatcgaggcgatggacgcctgggtgcgcgaactgatc
gacaccggctacctccacaaccacacgcgcatgtggttcgcgagcatctgggtgttcacg
ctcggcctgccctggcagctcggcgccgacttcttccaccggcacctgctcgacggcgac
gccgcctcgaacacgctctcgtggcgctgggtcgccgggctgcagacgcggggcaagacg
tacctcgcgacggcctcgaacatttcgcggttcaccgacggccgcttctcgccggccggc
ctggccacgacggcccgcgccctcgacgaggaggcgctgccggcccggacccccgtcgac
ccggacgacgtcgtggggcgggtcggcgaccgggtcggactgctgctgcacgaggaggac
ctcgaggccggcagcctgctcgccgagcggcccgacctcgtccacacgctcctggccacg
gccgtgagcgccgacgccggtgcgcggtccccctcgggggtctcacccgtcgtcgccgcc
ttcacggccggggccgtggccgacgccgcggcgcgcacgctggacgcgagcgcgcgcccg
gcccgggtcctcgccgacgcggcgcccgcgacggtgctgagctgggcgagggccgagggc
ctcgacacggtcgtcgtgccgttcgccccggtcgggcccgtcgctgagcgactggaggcg
ctgcgccccgtgctcgacgccgagggcatcgccctcgtgacggtccgccgccggtgggac
ggcaccgcctggccccacgccgcccgcggcttcttcccgttccgcgagaggatcccggca
ctggtgcgtcagctctga
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