KEGG   Frigoribacterium sp. NBH87: F1C15_03765
Entry
F1C15_03765       CDS       T06748                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
frn  Frigoribacterium sp. NBH87
Pathway
frn03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:frn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    F1C15_03765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:frn03400]
    F1C15_03765
DNA repair and recombination proteins [BR:frn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     F1C15_03765
SSDB
Motif
Pfam: Ku HC2 Extensin_1
Other DBs
NCBI-ProteinID: QNE43046
LinkDB
Position
complement(815448..816476)
AA seq 342 aa
MRSIWKGAITFGLVNVPVKLYSATEDHDVSLHQVHDADGGRIRYQRRCEICGKVVDYEHI
DKAFDDGDRTVVLTEDDLKSLPEERSREIDVLEFVPSDQLDPIMFDRSYFLEPDSSSPKA
YVLLRRTLEETERTAIVHFSLRQKTRLAALRVRGDVLMLQTLLWDDEVREARFPVLDQTV
RISSKELDMSGSLVESLGDDFDPSQFEDDYQEELRKLIDAKLEEGESLDTNATFGRSGDD
DEEGDGGSDGEVIDLMEALRQSVERSRSAGSSRAPAKKRTGGAGSASGKAPAEKAAAKKA
AAKKAPAKKEPAKKAPAKKEPAKKAPAKKEPAKKTAATKKAS
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgcgatcgatctggaagggcgcgatcacgttcgggctcgtcaacgtgcccgtgaagctc
tacagcgccacggaggaccatgacgtctcgctgcaccaggtgcacgacgccgacggcggg
cggatccgctaccagcgacgctgcgagatctgcggcaaggtcgtcgactacgagcacatc
gacaaggccttcgacgacggcgaccgcacggtcgtgctgacggaggacgacctgaagtcg
ctgcccgaggagcgctcgcgcgagatcgacgtgctcgagttcgtgccgagcgaccagctc
gacccgatcatgttcgaccgcagctacttcctcgagccggactcgtcgtcacccaaggcc
tacgtgctgctgcggcgcacgctggaggagaccgagcgcaccgcgatcgtgcacttctcg
ctgcgccagaagacccgcctcgccgccctgcgcgtgcgcggcgacgtgctgatgctgcag
acgctgctctgggacgacgaggtgcgcgaggcgcgcttcccggtgctcgaccagacggtg
cggatcagctcgaaggagctcgacatgtcgggctcgctcgtcgagtcgctcggcgacgac
ttcgacccgtcgcagttcgaggacgactaccaggaggagctgcgcaagctcatcgacgcc
aagctcgaggagggcgagtcgctcgacaccaacgcgaccttcggccgcagcggcgacgac
gacgaggagggcgacggcgggtcggacggcgaggtcatcgacctgatggaggcgctgcgc
cagtcggtcgagcgcagccggtcggcggggtcgtcacgcgcccctgcgaagaagcgcacc
ggaggcgcggggtcggcgagcgggaaggccccggccgagaaggcggcggcgaagaaggcg
gcggcgaagaaggcgcccgcgaagaaggagcccgcgaagaaggctccggcgaagaaggag
cccgcgaagaaggctccggcgaagaaggagcccgcgaagaagaccgcggcgacgaagaag
gccagctga

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