Frigoribacterium sp. NBH87: F1C15_03765
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Entry
F1C15_03765 CDS
T06748
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
frn
Frigoribacterium sp. NBH87
Pathway
frn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
frn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
F1C15_03765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frn03400
]
F1C15_03765
DNA repair and recombination proteins [BR:
frn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
F1C15_03765
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Ku
HC2
Extensin_1
Motif
Other DBs
NCBI-ProteinID:
QNE43046
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All DBs
Position
complement(815448..816476)
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AA seq
342 aa
AA seq
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MRSIWKGAITFGLVNVPVKLYSATEDHDVSLHQVHDADGGRIRYQRRCEICGKVVDYEHI
DKAFDDGDRTVVLTEDDLKSLPEERSREIDVLEFVPSDQLDPIMFDRSYFLEPDSSSPKA
YVLLRRTLEETERTAIVHFSLRQKTRLAALRVRGDVLMLQTLLWDDEVREARFPVLDQTV
RISSKELDMSGSLVESLGDDFDPSQFEDDYQEELRKLIDAKLEEGESLDTNATFGRSGDD
DEEGDGGSDGEVIDLMEALRQSVERSRSAGSSRAPAKKRTGGAGSASGKAPAEKAAAKKA
AAKKAPAKKEPAKKAPAKKEPAKKAPAKKEPAKKTAATKKAS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcgatctggaagggcgcgatcacgttcgggctcgtcaacgtgcccgtgaagctc
tacagcgccacggaggaccatgacgtctcgctgcaccaggtgcacgacgccgacggcggg
cggatccgctaccagcgacgctgcgagatctgcggcaaggtcgtcgactacgagcacatc
gacaaggccttcgacgacggcgaccgcacggtcgtgctgacggaggacgacctgaagtcg
ctgcccgaggagcgctcgcgcgagatcgacgtgctcgagttcgtgccgagcgaccagctc
gacccgatcatgttcgaccgcagctacttcctcgagccggactcgtcgtcacccaaggcc
tacgtgctgctgcggcgcacgctggaggagaccgagcgcaccgcgatcgtgcacttctcg
ctgcgccagaagacccgcctcgccgccctgcgcgtgcgcggcgacgtgctgatgctgcag
acgctgctctgggacgacgaggtgcgcgaggcgcgcttcccggtgctcgaccagacggtg
cggatcagctcgaaggagctcgacatgtcgggctcgctcgtcgagtcgctcggcgacgac
ttcgacccgtcgcagttcgaggacgactaccaggaggagctgcgcaagctcatcgacgcc
aagctcgaggagggcgagtcgctcgacaccaacgcgaccttcggccgcagcggcgacgac
gacgaggagggcgacggcgggtcggacggcgaggtcatcgacctgatggaggcgctgcgc
cagtcggtcgagcgcagccggtcggcggggtcgtcacgcgcccctgcgaagaagcgcacc
ggaggcgcggggtcggcgagcgggaaggccccggccgagaaggcggcggcgaagaaggcg
gcggcgaagaaggcgcccgcgaagaaggagcccgcgaagaaggctccggcgaagaaggag
cccgcgaagaaggctccggcgaagaaggagcccgcgaagaagaccgcggcgacgaagaag
gccagctga
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