Frigoribacterium sp. NBH87: F1C15_05175
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Entry
F1C15_05175 CDS
T06748
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
frn
Frigoribacterium sp. NBH87
Pathway
frn03030
DNA replication
frn03430
Mismatch repair
frn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
frn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F1C15_05175
03430 Mismatch repair
F1C15_05175
03440 Homologous recombination
F1C15_05175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
frn03032
]
F1C15_05175
03400 DNA repair and recombination proteins [BR:
frn03400
]
F1C15_05175
Enzymes [BR:
frn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F1C15_05175
DNA replication proteins [BR:
frn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F1C15_05175
DNA repair and recombination proteins [BR:
frn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F1C15_05175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QNE43286
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All DBs
Position
1118426..1119025
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AA seq
199 aa
AA seq
DB search
MPIDFTAIDFETANASSASACSVGLVKVRDGVVVDKVGWLIKPPAGHDAFLEWNTRIHGI
VADDVIGAFEWEEQFDLIADFAGIDVFVAHNAGFDMGVIRAACHATGIHPPDWAYLCSLQ
VARKTYALDSYRLPMAAAAAGFTGFSHHDALADAEACAAIVTHAAAVHGADDLRQLAEAS
RVTMKRLTPLSGAAATLRA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatcgacttcaccgcgatcgacttcgagaccgccaacgcgagcagcgcgtcggcc
tgttccgtcggcctcgtcaaggtgcgcgacggcgtcgtcgtcgacaaggtcggctggctg
atcaagccgcccgccggccacgacgccttcctcgagtggaacacccgcatccacgggatc
gtcgccgacgacgtcatcggcgccttcgagtgggaggagcagttcgacctcatcgccgac
ttcgccggcatcgacgtcttcgtcgcccacaacgccgggttcgacatgggcgtcatccgc
gccgcctgccacgccacgggcatccacccgcccgactgggcctacctctgcagcctccag
gtggcgcgcaagacgtacgccctcgactcctaccggctcccgatggcggccgccgccgcg
ggcttcacgggcttctcacaccacgacgccctcgccgacgccgaggcctgcgcggccatc
gtgacccacgcggccgcggtgcacggcgccgacgacctccggcagctcgccgaggcctcg
cgcgtgaccatgaagcgcctcacaccgctgtcgggggctgctgcgacactgcgggcatga
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