Frigoribacterium sp. NBH87: F1C15_05590
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Entry
F1C15_05590 CDS
T06748
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
frn
Frigoribacterium sp. NBH87
Pathway
frn00061
Fatty acid biosynthesis
frn00071
Fatty acid degradation
frn01100
Metabolic pathways
frn01212
Fatty acid metabolism
frn02024
Quorum sensing
frn04146
Peroxisome
Module
frn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
frn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
F1C15_05590
00071 Fatty acid degradation
F1C15_05590
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
F1C15_05590
09145 Cellular community - prokaryotes
02024 Quorum sensing
F1C15_05590
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
frn01004
]
F1C15_05590
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
frn04147
]
F1C15_05590
Enzymes [BR:
frn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
F1C15_05590
Lipid biosynthesis proteins [BR:
frn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
F1C15_05590
Exosome [BR:
frn04147
]
Exosomal proteins
Exosomal proteins of breast milk
F1C15_05590
Exosomal proteins of breast cancer cells
F1C15_05590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QNE43356
LinkDB
All DBs
Position
complement(1209166..1210869)
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AA seq
567 aa
AA seq
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MTSTTETPASTSTGTSTSPSPSPGSGTGTRPGPGAPGDRSTAPTRATASVAAVLAESARR
FPDDVAVIVGDQRTTYAELWAQTLAYAGALRAKGVTEGARVAMLVPNVADFPRVYYATLA
LGAVAVPVHALLKQHEIEYVLRDSGATMLVCAAPLLAEGAAGAALAGVDVVTVLAPPSSV
DPHGTGHDRLEALAEASEPLDTYVPRDPFDTATILYTSGTTGQPKGAEGSHFALLEQVNT
NLMTTFDMTRGDVLLGALPLFHTFGQTCTMNTGFRAGATIVMLPKFDGDGALAAMVEHGC
EIFMGVPTMYMALLDAATRTEARPALRYAISGGASMPLAVLERFQAVFDAPIHEGYGLTE
TSPVATFNHVGRPPRPGTIGTPIWGVDVEIADPGSVDAIVLLPHGEIGELVIRGHNLMNG
YLNRPDDTAAAIVDGWFRTGDLGTKDDDGYLTIVDRTKDMIIRNGYNVYPRQVEEVLATH
PDVAMAAVFGVPHAVHGQEIEAAVVLRPGATATPEQLIAHVSDEIAAYKFPRVVHVLDAL
PIGPSGKVLKRALVDRFSAGEEPARAS
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaccacggagaccccggccagcaccagcaccggcaccagcaccagcccgagc
ccgagccccggctccggcaccgggacccgccccggccccggcgccccgggcgaccggagc
accgcacccacccgcgccaccgcctccgtcgccgctgtcctcgccgagtcggcgcggcgg
ttccccgacgacgtcgccgtcatcgtcggcgaccagcggaccacctacgccgagctgtgg
gcgcagaccctcgcctacgccggcgcgctccgcgccaagggcgtcaccgagggcgcccgc
gtcgcgatgctcgtgcccaacgtcgccgacttcccccgcgtctactacgcgaccctcgcc
ctcggcgcggtcgcggtgcccgtccacgcgctgctcaagcagcacgagatcgagtacgtg
ctccgcgacagcggggcgacgatgctcgtctgcgccgcgccgctgctcgccgagggcgcc
gccggcgccgcgctcgccggggtcgacgtcgtgaccgtgctggcgcctccctcgtccgtg
gacccgcacggcaccgggcacgaccgcctcgaggcgctcgccgaggcgagcgagccgctc
gacacctacgtgccccgcgacccgttcgacaccgccaccatcctctacacgagcggcacg
acgggccagcccaagggggccgagggctcgcacttcgccctgctcgagcaggtgaacacc
aacctgatgacgaccttcgacatgacccgcggcgacgtgctgctcggggcgctcccgctc
ttccacaccttcgggcagacctgcacgatgaacaccggattccgggccggggccacgatc
gtcatgctgccgaagttcgacggcgacggcgcgctcgcggccatggtcgagcacggctgc
gagatcttcatgggcgtcccgacgatgtacatggcgctgctcgacgccgcgacgcgcacc
gaggcacgaccggcgctccggtacgcgatctcgggcggcgcctccatgccgctcgccgtc
ctcgagcgcttccaggccgtcttcgacgctccgatccacgagggctacggcctcaccgag
acctccccggtcgccaccttcaaccacgtcggccgcccgccgcggcccggcacgatcggc
acgcccatctggggcgtcgacgtcgagatcgccgacccgggctccgtcgacgcgatcgtc
ctgctgccgcacggcgagatcggcgagctcgtgatccgcggccacaacctcatgaacggc
tacctgaaccgccccgacgacacggccgcggccatcgtcgacggctggttccgcaccggt
gacctcggcacgaaggacgacgacggctacctcacgatcgtcgaccgcacgaaggacatg
atcatccgcaacggctacaacgtgtacccgcggcaggtcgaggaggtgctcgccacccac
cccgacgtcgccatggcggccgtgttcggtgtgccgcacgcggtgcacgggcaggagatc
gaggcggcggtggtgctccgccccggcgccacggccacccccgagcagctgatcgcccac
gtctccgacgagatcgccgcgtacaagttcccgcgggtcgtccacgtgctcgacgccctg
ccgatcggccccagcggcaaggtgctcaagcgggccctcgtcgaccggttcagcgcgggg
gaggagccggcccgcgcctcctga
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