Frigoribacterium sp. NBH87: F1C15_07150
Help
Entry
F1C15_07150 CDS
T06748
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
frn
Frigoribacterium sp. NBH87
Pathway
frn03420
Nucleotide excision repair
frn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
frn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F1C15_07150
03430 Mismatch repair
F1C15_07150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frn03400
]
F1C15_07150
Enzymes [BR:
frn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F1C15_07150
DNA repair and recombination proteins [BR:
frn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F1C15_07150
MMR (mismatch excision repair)
Other MMR factors
F1C15_07150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_11
PAC4
Motif
Other DBs
NCBI-ProteinID:
QNE43609
LinkDB
All DBs
Position
complement(1556898..1559321)
Genome browser
AA seq
807 aa
AA seq
DB search
MTIVLEPSDAAGGSGDPLTAGLNPQQKEAVEYRGQSLLIVAGAGSGKTSVLTRRIAGLIA
SREAWPSQILAITFTNKAAAEMRERVGHLVGQAGEGMWISTFHSACVRILRREAEQFGFT
KSFTIYDSADSRALLKRILKELDADSLGFTVSQASGKISKLKNELTDVETYSRQINAGDP
QDVMFLEIFRQYTRELQRANAFDFDDLIAQTVFLFRAFPHVAALYQRRFRHILVDEYQDT
NHAQYALIRELTRPVDPEIVDDLERGGQYVQSMRDGSGRIPGASLTVVGDSDQSIYAFRG
ADIRNIVEFERDFPHSKVILLEQNYRSTQNILDAANAVISNNFDRQAKNLFTTVGAGEKI
TGFTGYTGHDEAQFVADEIATLREGGMAYKDMAVFYRTNSQTRALEEIFIRSAIPYRVLG
GTKFYERAEIKDAMAYLITVANPLDPMALRRIMNVPKRGIGPATETAMQRWADQHEAPLR
EALRNADQLGLGPKVTGAITGLGQLLDGVQATAATAPVHEILTTLIEGSGIIEALRASQD
PQDEARAENIDELVAVTKEFQRNNPDGTLLDFLTEVTLVAAADDLDDTIGTVSLMTLHTA
KGLEYEAVFLTGVEEDLLPHRMSASEPGGPAEERRLFYVGITRARKHLFLSLAMTRAQFG
EVNVAMPSRYLQEIPVELIDWKQSPGMANSRGGTQPRALNARREGGAGDRLGSTPRASGG
YGGGSYDRATAAAKTKPKTEWSNRVTGTVRDNGDLELEQGDRISHVDFGEGRVMAVTGVG
ARRIAEVLFDTAGRKKLLIKVAPIEKI
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgtgctcgagccctctgacgctgccggcggttccggcgaccctctgaccgcg
gggctgaacccccagcagaaagaagcggtcgagtaccgcgggcagtcgctgctgatcgtg
gccggtgccggctcgggcaagacgagcgtgctgacccggcgcatcgccgggctcatcgcg
tcgcgcgaggcctggccgagccagatcctcgccatcaccttcacgaacaaggccgcggcc
gagatgcgcgagcgggtcggccacctcgtcggccaggccggcgagggaatgtggatcagc
acgttccacagcgcctgcgtgcgcatcctccggcgcgaagccgagcagttcggcttcacg
aagagcttcaccatctacgactcggcggactcccgggcgctgctgaagcgcatcctgaaa
gagctggacgccgactcgctcggcttcacggtcagccaggcgtcgggcaagatctcgaag
ctgaagaacgagctgaccgacgtcgagacctactcgcggcagatcaacgcgggcgacccg
caagacgtgatgttcctcgagatcttccggcagtacacgcgcgagctgcagcgggcgaac
gcgttcgacttcgacgacctgatcgcgcagacggtcttcctcttccgggccttcccgcac
gtggccgcgctctaccagcggcggttccggcacatcctcgtcgacgagtaccaagacacg
aaccacgcgcagtacgcgctgatccgcgagctgacgcggccggtcgaccccgagatcgtc
gacgacctcgagcgcggcggtcagtacgtgcagtcgatgcgcgacggcagcgggcggatc
cccggcgcctccctcaccgtggtcggcgactccgaccagtcgatctacgccttccgcggc
gccgacatccgcaacatcgtcgagttcgagcgcgacttcccccactcgaaggtcatcctg
ctcgagcagaactaccgctcgacccagaacatcctcgacgcggccaacgccgtcatctcg
aacaacttcgaccgccaggcgaagaacctcttcacgacggtcggtgcgggcgagaagatc
accgggttcacgggctacaccgggcacgacgaggcccagttcgtcgccgacgagatcgcg
acgctgcgcgagggcggcatggcctacaaagacatggccgtgttctaccgcaccaactcg
cagacccgagcgctcgaggagatcttcatccgttcggccatcccgtaccgggtgctcggc
ggcacgaagttctacgagcgcgccgagatcaaggacgccatggcgtacctgatcaccgtc
gcgaacccgctcgacccgatggcgctgcgccgcatcatgaacgtgccgaagcgcggcatc
gggccggcgaccgagacggcgatgcagcgctgggccgaccagcacgaggcgccgctgcgc
gaggcgctgcgcaacgccgaccagctgggtctcggcccgaaggtgaccggggcgatcacg
ggcctcggccagctgctcgacggcgtgcaggccacggccgcgacggcgccggtgcacgag
atcctcaccacgctcatcgagggcagcggcatcatcgaggcgctgcgggcgtcgcaagac
ccgcaagacgaggcccgcgccgagaacatcgacgagctcgtggcggtgacgaaggagttc
cagcgcaacaaccccgacggcaccctgctcgacttcctcaccgaggtgaccctggtcgcc
gcggccgacgacctcgacgacacgatcggcaccgtgtcgctgatgacgctgcacacggcg
aagggcctcgagtacgaggccgtcttcctcaccggcgtcgaagaagacctgctgccgcac
cgcatgtcggcgagcgagcccggcggccccgcggaggagcgacggctgttctacgtcggc
atcacgcgtgcccgtaagcacctcttcctctcgctggcgatgacgcgggcgcagttcggc
gaggtgaacgtggcgatgccgtcgcggtacctgcaagagatcccggtcgagctgatcgac
tggaagcagtcgcccggcatggccaacagccgaggaggcacgcagccgcgggcgctcaac
gcgcgtcgcgagggcggtgcgggcgaccgtctcggctcgaccccgcgcgccagcggcggc
tacggcggcggcagctacgaccgcgcgaccgcggcggccaagaccaagccgaagacggag
tggtcgaaccgggtcaccggcaccgtgcgcgacaacggcgacctcgagctcgagcagggt
gaccgcatctcgcacgtcgacttcggtgaggggcgcgtcatggccgtcaccggcgtcggt
gcccgccgcatcgccgaggtgctgttcgacacggccggccgcaagaagctgctgatcaag
gtcgcgccgatcgagaagatctag
DBGET
integrated database retrieval system
