Frigoribacterium sp. NBH87: F1C15_07355
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Entry
F1C15_07355 CDS
T06748
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
frn
Frigoribacterium sp. NBH87
Pathway
frn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
frn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
F1C15_07355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
frn03021
]
F1C15_07355
03400 DNA repair and recombination proteins [BR:
frn03400
]
F1C15_07355
Enzymes [BR:
frn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
F1C15_07355
Transcription machinery [BR:
frn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
F1C15_07355
DNA repair and recombination proteins [BR:
frn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
F1C15_07355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AMIN-like
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QNE43644
UniProt:
A0A7G6YYS9
LinkDB
All DBs
Position
complement(1604144..1605136)
Genome browser
AA seq
330 aa
AA seq
DB search
MLIAQRPTLTEENISEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTEVILNIKQLVVSSEHDEPITAYLRKQGAGQVTAADISAPAGVEIHN
PELVIATLNDKAKFELELTIERGRGYVSAVQNRSEFSEAGQIPIDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVETKPAISPRDAIASAGRTLTELFGLARELNTAAEGIEIGPAPVD
AVLSSELQTPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVKDK
LVELGLSLKDTVPGFDGAHFYSGYDEEETN
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccaccctcaccgaggagaacatctcggagttccgctcgcgg
ttcgtcatcgagcccctcgagcccggcttcggctacaccctcggcaactcgctgcgtcgc
accctgctctcgtcgatccccggagccgctgtcaccagcatccgcatcgacggtgtgctg
cacgagttcacgacggtccccggtgtcaaggaagacgtcaccgaggtcatcctgaacatc
aagcagctcgtcgtctcgagcgagcacgacgagcccatcacggcgtacctgcgcaagcag
ggtgccggtcaggtcacggcggccgacatctcggcccccgccggcgtggagatccacaac
cccgagctcgtcatcgcgacgctcaacgacaaggcgaagttcgagctcgagctcacgatc
gagcgtggccgcggctacgtgtcggccgtgcagaaccgctcggagttcagcgaggccggt
cagatcccgatcgactcgatctactcgcccgtcctcaaggtgacgtaccgcgtcgaggcc
acccgtgccggtgagcgcaccgacttcgaccgcctcgtggtcgacgtcgagaccaagccc
gcgatctcgccccgtgacgccatcgcgtcggccggtcgcacgttgaccgagctgttcggc
ctggcccgtgagctcaacaccgccgccgagggcatcgagatcggccccgcgccggtcgac
gccgtcctctccagcgagcttcagacgccgatcgaggacctcgacctctccgtgcgcagc
tacaactgcctcaagcgcgagggcatcaacacggtgtccgagctcgtcgccctctcggag
acgcagctcatgaacatccgcaacttcggtcagaagtcggtcgacgaggtgaaggacaag
ctcgtggagctcggtctctcgctcaaggacacggtccccgggttcgacggagcccacttc
tacagcggctacgacgaggaagagaccaactag
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